Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1298 ATGTCATCTCAAACAAAATGTCGTGACAACCCGAGGTTTCGGATATGCGGGCCCCACCTCCATGTGCATTTCTGTTCCTTCTTCTCCTTTCTCGCTTTCTCATCACTCTCTGCTCTGGTTTCCAGCTATACCCTTTACCGCCATTTACTCATCTTTTCTTCTTCTTCTTCTGTTATTCTCTCTCGTCATTTCCTTCGCTTTCTCTCTTTGTTCCACCGGAGAACGAACATGAGGAAAAAATTGCGTGTAAAGTTCGAGCCCTTACTCATTTCCCTTTCTGGGCTATTTTCAGTCTTCGTCTTCGTTGAGTCTCAGGCAAACCCTAGCCCAGATGCTCCTGTAATGGAAGCTCTCAAGAAAAGCCTCAACGTACCTGATTCTATTGGATGGTCTGATTCGGACCACTGCAAGTGGAACCATGTTGTCTGCGATGAAGGTCGGGTCACGCGTATCCAAATCGGACGTCTAGGTCTTCAAGGTACGCTTCCTCCGAGTCTTGGAGATCTCACCGAGCTACAGCGCTTGGAGCTTCAGTATAATAACATTTCCGGTCCTCTTCCTAGCTTAAAGGGTTTGGGTTCTTTGCAAGTGCTTATTCTTAGTAACAACCAATTTAGTTCTATCCCTAGCGATTTTTTTACTGGCATGTCTCAACTTCAATCCGTGGAGATCGACAAAAACCCATTTCAGGAATGGGAGATACCTGAAAGTCTTCGATACGCTTCGTCTCTTCAGAACTTCTCGGCCAACTCGGCTAATATCACTGGCAAGATACCAGATTTTCTTGATGGAAATGTGTTTCCTGGTTTGGTCCTTTTGCATTTGTCCTTCAATAACCTCGAGGGTGGGTTTCCGGCGAGCTTTTCTGGTTTGCCGATCGAGACTTTGTGGGTTAATGGGCAGACAGGTAAACTTAACGGAACCATAGATTTTATGCAGAATATGACTTCCTTGAAGGAGGTTTGGCTGCATTCAAATGCATTTTCGGGTCCATTACCAGATTTTTCGGGCTTGAAGAGTTTGGAGACCCTGAGTTTAAGGGATAATTCGTTTACTGGTCCTGTTCCTTTGTCACTGATGAGTCTTAAATCGTTGAAGGTTGTTAATTTGACTAATAACTTACTTCAAGGGCCTTTGCCAGTGTTCGGTCCAGGAGTTGAAGTGGATATGAGTAAGGATTCGAATGACTTTTGCTTGCCAAGTCCTGGGGATTGTGATCCTAGGGTGAACATTCTGCTTTCCATTGTTAAGCTTATGGGATATCCTCAAAGATTTGCTAAGGAATGGAAAGGCAATGATCCATGTAATGATTGGCTTGGGATTACCTGTAGTAATGGGAACATTACTGTTGTTAATTTTCAGAGGATGGGTCTGTCTGGTACCATATCCCCAGAGTTTGCCTCAATCAAATCACTGCAAAGAATCATGCTTGCTGATAATGATCTCACCGGCACGATTCCCGTGGAGCTCACTACACTTCCTATGCTCACTGAACTGAATTTCGCAAATAATCAGCTTTATGGAAAGGTCCCATCTTTTAGGAGTAATATAATCCTTAACACTAAGGGTAACAAGGACATAGGCAAGGATAGAAGCAGTTCAACCCCTCCGGGTTCAGCGTCTCTGAACCCCACTGGTCAAGGTACAACAGCAGAAGATGGTGGGATTTCTGCAAATGGCGGCAAAAAATCTTCTCATGTTGCAGTAATTGTAATTGCTGTAGTTGGGGGTGTATTTTTGGTTTCAATTATCGGTGTCATAGTTTTCTGCTTGTATAGAATGAAGCAAAAGAAGTTAAGCAGGGTACAGAGCCCTAATGCTATGGTAATTCACCCTCGTCATTCTGGATCAGATAACGAGAGTTTGAAAATAACAGTTGCAGGCTCAAGTGTCAGTGTTGGCACTGCTAGTGAAACTCAAACCGTACCCGGCAGTGAGGCAGGAGGAGACATCCAAATGGTTGAAGCTGGAAACATGTTCATTTCCATACAAGTCCTTCGGAACGTGACTGACAATTTCAGTGAAAAGAATATATTGGGACAAGGTGGTTTTGGAACTGTATACAAAGGTGAACTGCATGATGGCACCAAAATTGCAGTGAAAAGAATGGAGTCTGGAGCAATAACCGGAAAGGGTGCATCAGAATTTAAGTCAGAAATTGCTGTTTTGACAAAAGTTCGCCACCGGCATCTTGTTGCCCTTCTTGGCTACTGCTTGGATGGGAATGAAAAGCTTTTGGTGTATGAATACATGCCTCAGGGTACACTAAGTAGGCATCTGTTTAACTGGCCAGAAGAAGGATTACAACCCTTGGACTGGAATAGGAGGTTGACCATTGCCTTAGATGTGGCTAGGGGTGTTGAGTATCTTCATGGCTTAGCCCATCAAAGCTTTATACATAGAGACTTAAAGCCCTCAAACATTCTTCTTGGAGATGATATGAGAGCAAAGGTTGCAGATTTTGGTCTTGTCCGTCTTGCTCCAGAAGGAAAAGCCTCAATAGAAACACGAATTGCAGGAACGTTTGGATACTTGGCACCAGAATACGCAGTTACTGGCCGTGTGACGACTAAAGTAGATGTATACAGTTTTGGGGTGATACTGATGGAAATCATAACTGGAAGGAAAGCGCTTGACGAAACCCAACCCGAGGACAGCATGCACCTTGTAACATGGTTCCGCAGAATGTACATAAACGAAGAATCATTTAGCAAGGCCATTGATTCAACGATCGATCGCAATGAGGAAACTCTTGCCAGCATTCGCACAGTGGCTGAGCTAGCAGGCCACTGCTGTGCACGAGAGCCATATCAAAGGCCAGACATGGGTCACGCCGTGAATGTCCTTTCCTCTTTGGCAGAACTCTGGAAGCCATCTGACCAGAGTTCTGAAGATATATATGGGATTGACCTTGACATGTCTTTGCCCCAAGCCCTTAAGAAATGGCAGGCTTATGAAGGCGGAGGAGGAGGAGGAGGCTCAGTGGACTCATCTTCTTCTTCACTCCTTCCGAGCCTGGACAACACGCAGACAAGCATACCGACATGCCCATATGGTTTTGCCGAGTCTTTCACATCAGCAGATGGGAGGTGA 3093 0.4481 MSSQTKCRDNPRFRICGPHLHVHFCSFFSFLAFSSLSALVSSYTLYRHLLIFSSSSSVILSRHFLRFLSLFHRRTNMRKKLRVKFEPLLISLSGLFSVFVFVESQANPSPDAPVMEALKKSLNVPDSIGWSDSDHCKWNHVVCDEGRVTRIQIGRLGLQGTLPPSLGDLTELQRLELQYNNISGPLPSLKGLGSLQVLILSNNQFSSIPSDFFTGMSQLQSVEIDKNPFQEWEIPESLRYASSLQNFSANSANITGKIPDFLDGNVFPGLVLLHLSFNNLEGGFPASFSGLPIETLWVNGQTGKLNGTIDFMQNMTSLKEVWLHSNAFSGPLPDFSGLKSLETLSLRDNSFTGPVPLSLMSLKSLKVVNLTNNLLQGPLPVFGPGVEVDMSKDSNDFCLPSPGDCDPRVNILLSIVKLMGYPQRFAKEWKGNDPCNDWLGITCSNGNITVVNFQRMGLSGTISPEFASIKSLQRIMLADNDLTGTIPVELTTLPMLTELNFANNQLYGKVPSFRSNIILNTKGNKDIGKDRSSSTPPGSASLNPTGQGTTAEDGGISANGGKKSSHVAVIVIAVVGGVFLVSIIGVIVFCLYRMKQKKLSRVQSPNAMVIHPRHSGSDNESLKITVAGSSVSVGTASETQTVPGSEAGGDIQMVEAGNMFISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAITGKGASEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLQPLDWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEIITGRKALDETQPEDSMHLVTWFRRMYINEESFSKAIDSTIDRNEETLASIRTVAELAGHCCAREPYQRPDMGHAVNVLSSLAELWKPSDQSSEDIYGIDLDMSLPQALKKWQAYEGGGGGGGSVDSSSSSLLPSLDNTQTSIPTCPYGFAESFTSADGR 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1298 1030 Gene3D Transferase(Phosphotransferase) domain 1 751 970 - -
Alju07g1298 1030 SMART LRR_typ_2 192 215 IPR003591 -
Alju07g1298 1030 SMART LRR_typ_2 493 520 IPR003591 -
Alju07g1298 1030 SMART LRR_typ_2 169 191 IPR003591 -
Alju07g1298 1030 SMART LRR_typ_2 267 290 IPR003591 -
Alju07g1298 1030 SMART LRR_typ_2 315 337 IPR003591 -
Alju07g1298 1030 SUPERFAMILY L domain-like 410 516 - -
Alju07g1298 1030 FunFam receptor protein kinase TMK1 751 968 - -
Alju07g1298 1030 MobiDBLite consensus disorder prediction 524 561 - -
Alju07g1298 1030 Gene3D Ribonuclease Inhibitor 110 405 IPR032675 -
Alju07g1298 1030 Pfam Leucine rich repeat N-terminal domain 410 444 IPR013210 -
Alju07g1298 1030 Pfam Leucine rich repeat N-terminal domain 111 144 IPR013210 -
Alju07g1298 1030 Gene3D Ribonuclease Inhibitor 407 531 IPR032675 -
Alju07g1298 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 798 810 IPR008271 GO:0004672|GO:0006468
Alju07g1298 1030 ProSiteProfiles Leucine-rich repeat profile. 194 215 IPR001611 GO:0005515
Alju07g1298 1030 SMART serkin_6 673 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1298 1030 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
Alju07g1298 1030 Gene3D Phosphorylase Kinase; domain 1 634 750 - -
Alju07g1298 1030 Pfam Protein tyrosine and serine/threonine kinase 676 947 IPR001245 GO:0004672|GO:0006468
Alju07g1298 1030 FunFam Receptor-like kinase TMK4 109 403 - -
Alju07g1298 1030 SUPERFAMILY L domain-like 117 381 - -
Alju07g1298 1030 MobiDBLite consensus disorder prediction 530 554 - -
Alju07g1298 1030 FunFam receptor protein kinase TMK1 634 750 - -
Alju07g1298 1030 MobiDBLite consensus disorder prediction 990 1011 - -
Alju07g1298 1030 ProSiteProfiles Protein kinase domain profile. 673 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1298 1030 CDD STKc_IRAK 679 952 - -
Alju07g1298 1030 MobiDBLite consensus disorder prediction 993 1011 - -
Alju07g1298 1030 FunFam Leucine-rich repeat receptor-like kinase 407 530 - -
Alju07g1298 1030 SUPERFAMILY Protein kinase-like (PK-like) 653 957 IPR011009 -
Alju07g1298 1030 PANTHER OSJNBA0070M12.3 PROTEIN 95 1030 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1298 Alju-ChrAlju07 37747422 37751823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1298 160 955 Receptor kinase-like Gene Family AT5G07280 31.907 4.00e-87 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Alju07g1298 PK_Tyr_Ser-Thr 1.1e-46 CL0016