Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1295 ATGTCTCCAATTTCAAAGCAGTTCTCAGCACAGCCAAGCCAAGTCATGAGACCTAAGTTGGATCTTGAAGTGGAGGCTTCTGCAGAAAATGAATCCGAAATTAGCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAACAGCCTCAACAACACATCAGACAACACAAACAACATAGGATTTCAGCTAAACAATGCATATCCTCTTTCACTTGACTTAACTCTCAGCTTCAGTAACAACGAGCTAGGCCACGCTGGAGACTCCTCCGTGGGGCTCTCATTCTCTAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACCACATCGACCACCATCCAAAGAGTGTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCACAGGCTCTTGGTGGTCACCAGAACGCACACAAGAGGGAAAGAACACTTGCAAAGAGAGCCATGAGAATGGGGTTTTTCTCTGATAGGTATACAAATTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCCTTAGGAATTAAAGCACACTCCTCAATTCACCATGGCTTTTCACCATCAATGGTAAGGCCTTATGAGATGAAAACTAATGCGAGATTTGATCAAGGGTATGCCGGAATGCCTGTGTTCGTGGAGGATGATGAGTCTGAACTGCTATGGCCTGGTAGTTTCCGGCAGGTTGGAGAGGTAAGTGATAATGATGATAATGATCATCATCGTCATCATCAGAAGTTCATGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCAGAAGTACACCTTGAGCTAGAGGACTCAACAACACCAGATTTAACGTTGAAGCTTTGA 867 0.4452 MSPISKQFSAQPSQVMRPKLDLEVEASAENESEISSQVASNIFIHEISAGPSSDNSLNNTSDNTNNIGFQLNNAYPLSLDLTLSFSNNELGHAGDSSVGLSFSSTSESSNEPASQTTSTTIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSDRYTNLASLPLHGSFRSLGIKAHSSIHHGFSPSMVRPYEMKTNARFDQGYAGMPVFVEDDESELLWPGSFRQVGEVSDNDDNDHHRHHQKFMVTGSSNLSFAEVNPEVHLELEDSTTPDLTLKL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1295 288 SUPERFAMILY beta-beta-alpha zinc fingers 122 152 IPR036236 -
Alju07g1295 288 FunFam Zinc finger protein 2 102 171 - -
Alju07g1295 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 152 IPR013087 -
Alju07g1295 288 Gene3D Classic Zinc Finger 102 168 - -
Alju07g1295 288 MobiDBLite consensus disorder prediction 96 117 - -
Alju07g1295 288 ProSitePatterns Zinc finger C2H2 type domain signature. 127 147 IPR013087 -
Alju07g1295 288 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 53 215 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1295 Alju-ChrAlju07 37700905 37703437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1295 107 288 C2H2 Transcription Factor Family AT1G66140 50.000 8.85e-49 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1295 07 37700905 37703437 Alju07g1295 07 37700905 37703437 CCT
Alju07g1295 07 37700905 37703437 Alju07g1295 07 37700905 37703437 ECH