Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1292 ATGCCCTTGGAAGCAGGGATTTTCATAGAGCCACCTGCTTCTTCTTCGTCAACCTCTTCTTCTGCTACTCCTGATCTTTCCCTTCACATAAGCCCTCCTTCTTCTTCTTTGATTTGCAGCAACATTAACAACAACTATGAAGCTCGGCACTATATTCCTTCTTCTTCTCTTTCCCTCTCTCATGCCCACACTGAACTCTCACTCGCTACCAATTTCGCCACTTCTAATTCAACACAGGAACCACTACTAACCCTCCACCACCATACCAAAAACAACACCATCAACCCTTATTTTCAGACCGCCCGCCACCACCACCACCACCATTTCCTCCACCAGAATATGAATAACTATGGAGGAATCTCATTGCTTGATGCCTCTCCTTCTTCTTCCTCCGACGGATTGAGGCCCATCAAAGGGATTCCCGTCTATCACAACCGCTCCTTCCCTTTCTTGCCGGCGGTGGATAACCACCACCACCACCACCAGCAAACCAAGATGTGCTTCTACAATCCTCCTTCTGCTTCTTCTCCGTACATGGCGGTGGCGGCCTCCGGGGGCTTGGATCCCGTGTCGGCGGCATACAGGACGGCGGCAGGCGGCAGGTTGAATAATGGGATTTCTGGTGAAGCCTTCAAATCTCATCATCACCAGTATGGGAATATGGTGGGACCATCTTCTTCTTCACATGAGGCTTCTTCGTCGTCTCCGAGCAGTAGTGGGCTCATGATGATGAGATCCAGATTCTTGCCTAAGCTTCCCACTAAACGCAGCATGAGAGCTCCCAGAATGCGGTGGACCACTACCCTCCACGCTCGCTTCGTTCACGCCGTCGAGCTCCTCGGCGGCCACGAAAGAGCAACTCCGAAATCAGTTCTAGAGCTGATGGATGTGAAGGATCTTACCTTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCACTCAGATGGGTCTGGAGAAGATGAAATATTTGCAGATCAAAGAGGAAGCAAAACAGATAGGTCAGTGCAGCATGAAATGGACTACTCTTCTACTACCACTATACTATGGAGCAATTCTTCAAGTAGTAGAGAGCCATGGCTTCAAAATAGTACCAAAGACATGGATACTCTGAGACCTGCCTTTCAGACTCCACCATTATCATCATCAGGGCATCAAATTCAGGAGTGTGATTCAAGGCATGTGAAGAACAACATATCAAGCTCTAATTTGGAGTGCAAGAACCCAAGCTTGGAGTTTACGTTGGGAAGACCAGATTGGGATGGCAAATGA 1311 0.4851 MPLEAGIFIEPPASSSSTSSSATPDLSLHISPPSSSLICSNINNNYEARHYIPSSSLSLSHAHTELSLATNFATSNSTQEPLLTLHHHTKNNTINPYFQTARHHHHHHFLHQNMNNYGGISLLDASPSSSSDGLRPIKGIPVYHNRSFPFLPAVDNHHHHHQQTKMCFYNPPSASSPYMAVAASGGLDPVSAAYRTAAGGRLNNGISGEAFKSHHHQYGNMVGPSSSSHEASSSSPSSSGLMMMRSRFLPKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDEIFADQRGSKTDRSVQHEMDYSSTTTILWSNSSSSREPWLQNSTKDMDTLRPAFQTPPLSSSGHQIQECDSRHVKNNISSSNLECKNPSLEFTLGRPDWDGK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1292 436 MobiDBLite consensus disorder prediction 219 242 - -
Alju07g1292 436 MobiDBLite consensus disorder prediction 216 242 - -
Alju07g1292 436 MobiDBLite consensus disorder prediction 412 436 - -
Alju07g1292 436 Gene3D - 260 317 - -
Alju07g1292 436 NCBIfam myb-like DNA-binding domain, SHAQKYF class 261 314 IPR006447 GO:0003677
Alju07g1292 436 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Alju07g1292 436 FunFam Myb family transcription factor 259 317 - -
Alju07g1292 436 MobiDBLite consensus disorder prediction 332 351 - -
Alju07g1292 436 MobiDBLite consensus disorder prediction 317 351 - -
Alju07g1292 436 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 24 435 IPR044847 GO:0000976|GO:0006355|GO:0010158
Alju07g1292 436 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1292 Alju-ChrAlju07 37635244 37639336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1292 135 436 G2-like Transcription Factor Family AT5G16560 50.155 2.54e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju07g1292 Myb_DNA-binding 2.2e-05 CL0123