Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1272 ATGGCCATTCATGATCAACCTGGAGTCACCAGATCTCACAGTATTCCGGTAGGAAATGATCAGTTTTCTTGTGGCAATGACTATGCTCCAAAGGTGAGGAAACCGTATACCATCACAAAACAAAGAGAGAGATGGACAGATGAAGAGCACAAGAAGTTTCTTGAAGCTTTAAAGCTGTATGGCCGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACTACAGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGTGATCCTTGTGGGAACAATACAAACTCAATTGAGTCCATTGAAATTCCACCCCCACGTCCGAAACGAAAGCCTATGCGTCCTTACCCTCGTAAGCTAGTGGAGCTCCCTAACAAAGAAGCTTCCATACCAAAACAGCTAATGATGTCTAATTCTCTGAAATCATCAGATTTTGACCAAGAAAACCGATCTCCCAAGTCAGTGTTATCTGCAGTCGGTTCAGACACTCTTGGTTCCTCTGATTCAGACACACCAAATGGAAGCTCATCCCCAGTTTCATCCATTAGTCCTGTTCATACCAACAACTTTGTAGTTGCTGAACCTGAAAACCTACAATTGGAGGAGGATGGGTGTCCACCATCCGCTGGGCTAAATGCTGATCCAACTCTTGATGAGCAACCACTTATGAAGCATGAACAGCTATTGAAACACAGCATATCTCCCAAGGAAGATGCTGCAGAAGAATCATCTGCTAGGATTCTGAAGCTTTTTGGGACGACTTTGTTGGTAACAGATAACTGTGGGGCATCCTCTCCAACAACGGAAGCATGCAAGTTGATTCACTCGAAATTCTTGCCGATGAAATGTGATGAGGAAAGTTTGCATAATGGAACACTTGGTGCTGTCTGTAACATGCAGCTTGAGAGTGGAAATTCAGGGCTTGCAGAAGGTTCTTCTGCTTCTTTTGTTCCATGTTGGAGCATTCCCCACATTAGATCACTGCACAAGAAGGTGCCTGAAGGAAAACAACTAGACTCCTATCTTAGGGAAATTGAACATTTAGAAGTTATAAACACTAGCTCTTGTGTAAATAAGGATGAAAAATCTGATATGGAAGCCAAAAGAGATACTAAAGCTATATTTGATCTGAATAGGTGTGGGAAAGGGTTTGTGCCATATAAGAGGTGCATTGCAGAGAGGGAAAAACAGGCCTTGTCAGTAACTAAAGAGGAGAGGGAAGAACAAAGGATTCGCCTTTCCTTGTAA 1260 0.4278 MAIHDQPGVTRSHSIPVGNDQFSCGNDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTTVQIRSHAQKFFSKVLRDPCGNNTNSIESIEIPPPRPKRKPMRPYPRKLVELPNKEASIPKQLMMSNSLKSSDFDQENRSPKSVLSAVGSDTLGSSDSDTPNGSSSPVSSISPVHTNNFVVAEPENLQLEEDGCPPSAGLNADPTLDEQPLMKHEQLLKHSISPKEDAAEESSARILKLFGTTLLVTDNCGASSPTTEACKLIHSKFLPMKCDEESLHNGTLGAVCNMQLESGNSGLAEGSSASFVPCWSIPHIRSLHKKVPEGKQLDSYLREIEHLEVINTSSCVNKDEKSDMEAKRDTKAIFDLNRCGKGFVPYKRCIAEREKQALSVTKEEREEQRIRLSL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1272 419 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Alju07g1272 419 MobiDBLite consensus disorder prediction 135 189 - -
Alju07g1272 419 MobiDBLite consensus disorder prediction 98 189 - -
Alju07g1272 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Alju07g1272 419 Pfam Myb-like DNA-binding domain 42 85 IPR001005 -
Alju07g1272 419 ProSiteProfiles SANT domain profile. 40 91 IPR017884 -
Alju07g1272 419 CDD SANT 44 87 IPR001005 -
Alju07g1272 419 PANTHER SWI/SNF COMPLEX-RELATED 25 293 - -
Alju07g1272 419 MobiDBLite consensus disorder prediction 108 125 - -
Alju07g1272 419 SUPERFAMILY Homeodomain-like 36 89 IPR009057 -
Alju07g1272 419 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 89 IPR006447 GO:0003677
Alju07g1272 419 MobiDBLite consensus disorder prediction 1 23 - -
Alju07g1272 419 FunFam protein REVEILLE 6 isoform X1 44 92 - -
Alju07g1272 419 SMART sant 41 89 IPR001005 -
Alju07g1272 419 Gene3D - 44 90 - -
Alju07g1272 419 Coils Coil 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1272 Alju-ChrAlju07 37332917 37335284 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju07g1272 Myb_DNA-binding 1.3e-13 CL0123