Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1265 ATGGCACCAGTTTCGTTTCCACCAGGATTCAGATTCCACCCAACAGATGAAGAGCTCGTGGCTTACTATCTGAAAAGAAAGATTAATGGCCTCAAGATTGAGTTAGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCGCTGTTACCAGGGAAAGACTTGGAGTGGTATTTCTTCAGTCCAAGAGACAGGAAATATCCGAACGGATCAAGAACAAACAGAGCTACAAGATGTGGATATTGGAAGGCGACAGGGAAAGATAGGAAAGTGAATTCACAGAGTAGAGCAGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCCCCTCATGGCTCTCGTACTGATTGGGTCATGCACGAGTATCGTCTTCACGAACGAGAATGTAAACCTGCTTCTTCTGCCATGCAGGAGGCATATTCTCTGTGTCGAGTGTTCAAGAAGAGCGCAGTGATAAGTCCAAAGGTAGAAGACGAGTACGTGAGGAGCAGTAGTCATCATAATCAGTATCAGTATCAGTATCAGCAGCAGATGGGTAGTGATCAGACGTCATCCACCATTAATAATAGTGAGCTTAATTACTGTGAGGGAAGAGGAGGCGAAGACTTGGACAGCTCAAATAATTACTTGGTGATGCCTCTTCATGATTCAGCCTACATGCACCACCCAAATAATGGGACAACCTTCAACAGTGTCCATAATAATAATAATAATAATCCAAGTTGGTCTCACTTCTTGTCTGATGATCCTTCTTTGTTAAGCCTTCCAACAACTTCTTCATTTCCCAACTATGCACCCGAATCCTATCCTCCTTCCAAGGTGGACATAGCTTTCGAATGTGCAAGGATGCATAGGTTCAGTATGCCTCCATTGGAGATGGAGGACTTCCCTCAAATTGGGATTCCTGAACTGAAGATGCCACAACAACCTCATCATCATCATCATTCTGGTGCCATTATTGGAAGCAGAACTACTGAAACCGATATTTTGCAGGAGATTCTATCAGTTGCTCATGCTTCTCAGGAACTCATTAATCACCCCACAAACTATTCACCCACCACATTGGGCGGTGCCGGCGGCAACAGCAACGAAAACTATGCTCCTCATGAAGAAGAAGATGATGACTTCACTTTCATGGTGGGAAGAGGAAGTGGGGATCAGAGCTATAACTACAACCACCAGGTGATGAGTGACTTGAGTTCCATGATGAGAGGCATTAATAATGAGACTACTACTACTACAAGGGAAGATCAGAACACAGTGAAGTCAATAGAGATTTCAGATCTAGATGATGAGTTCAAGGTAGAGAGGATGGTGGAGAACTTGAGATGGGTTGGAATGTCAAGCAAAAATATGGACAAGAGCTTTATGGAAGATCAAAAAATTGCTCCTATTGAGGATTTTACAAATTTCCAAATAAACAAGGAAGACAATGAGTTGCAAGCAGAATCTGTGCAACACCAAAGCAGCAACATGAATGACTTCTCATTGGGATTCATCAATTATGATGAACCAAACGAGAACTTCATAGATGAAGGCACCCCCATGGATGACTATTCAAGCTCTCCAAGCTGCTTTGAGGTTGTTGAGGAAGTGAAAGTCAGACATGGAATGTTTGTGGCAACTCGCCAAGCAGCCAACACATTCTTTCACCAGATAGTCCCTTCACAAACCCTCAAGGTTCATCTCAACCCAGTAATGGCAAATAACACTAATCTCTTAGTAGAAAATGCAGAAACAGCAACACAGACCGAAGATACACACAGAATGGAGAACCAAGGGTCCTATTTCATAAAACTAAAAGACTATGTGATGGGAAAGCTAATAATGAAGCCTTCAAAGACTGCCACTAGTGCTATTATGTTCATATTTGCATTTCTCTTGATGCATTGTGCTTCATATTTGGGGGAACATGCACAAATCCTGAAACTAGATCAGGAAAATGAAGCTGTCAAAGAGAAATATTACTCTGGTGCAATAAGCAGCAAGAAGAAATCCTCATGGAATGAGAAAGAAAGGGTTTGGTTTGTTGGTATCAAAAGTGGAAGAGGGTTTGGTGTGGTGTTGAAGAAGGTTGGGATTTTCCTTACAATTTCTCTGGCACTTTGCACCATGTGGGCTAACCACATCACAGTCGATTAA 2169 0.4255 MAPVSFPPGFRFHPTDEELVAYYLKRKINGLKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATRCGYWKATGKDRKVNSQSRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRLHERECKPASSAMQEAYSLCRVFKKSAVISPKVEDEYVRSSSHHNQYQYQYQQQMGSDQTSSTINNSELNYCEGRGGEDLDSSNNYLVMPLHDSAYMHHPNNGTTFNSVHNNNNNNPSWSHFLSDDPSLLSLPTTSSFPNYAPESYPPSKVDIAFECARMHRFSMPPLEMEDFPQIGIPELKMPQQPHHHHHSGAIIGSRTTETDILQEILSVAHASQELINHPTNYSPTTLGGAGGNSNENYAPHEEEDDDFTFMVGRGSGDQSYNYNHQVMSDLSSMMRGINNETTTTTREDQNTVKSIEISDLDDEFKVERMVENLRWVGMSSKNMDKSFMEDQKIAPIEDFTNFQINKEDNELQAESVQHQSSNMNDFSLGFINYDEPNENFIDEGTPMDDYSSSPSCFEVVEEVKVRHGMFVATRQAANTFFHQIVPSQTLKVHLNPVMANNTNLLVENAETATQTEDTHRMENQGSYFIKLKDYVMGKLIMKPSKTATSAIMFIFAFLLMHCASYLGEHAQILKLDQENEAVKEKYYSGAISSKKKSSWNEKERVWFVGIKSGRGFGVVLKKVGIFLTISLALCTMWANHITVD 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1265 722 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Alju07g1265 722 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Alju07g1265 722 FunFam Nac domain-containing protein 86 15 160 - -
Alju07g1265 722 MobiDBLite consensus disorder prediction 358 377 - -
Alju07g1265 722 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Alju07g1265 722 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 234 - -
Alju07g1265 722 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1265 Alju-ChrAlju07 37216875 37221990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1265 1 714 NAC Transcription Factor Family AT1G65910 41.701 1.98e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju07g1265 NAM 4.2e-40 No_clan