Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1245 ATGCTTCAACCACGTCGTAATCTGCTCCTTCTTTTTGCCACCTTCATATTCTGGTCATGTTGCAGCTCTTTCAACGGCGTCGTTTCGGACCCCCAGACTCATCTTCTGAACAGTGGTTGCAGCCAGTACAACGTCTCCAGCTTGGCCAGCTTCAACGACAACCTAAACGCAACGTTTCGAAACCTCAGAGATCAGGTGTCCAATCAGAGGAAGCTCTTCGCCACGGCGCAGCAAGTTAATGGAGGTAGCCCCTTTTACGCTCTTTTTCAATGCAGAAACTACCTCTCGGCCGCCGACTGTGCGTCTTGCTTCGACATCGCCGCCGCACAGATACGGAATTGCTCCGCCGGAGCCAACGGTGCTCGCGTCATCTATGACGGTTGCTTCCTCCGGTATGAGAGCAGCAGTTTCTATGATCAGACAACACAGCCTGGAAATAGCATGGTTTGTGGGAATCAAACTTCAAGAGATAACACAACATTTGACGCAGCAGTTGAACAAGTGCTAATCAATCTCCAAACAGCAACACCCAGAATTACTGGTTTCTTTGCAGCCACAAAAACTCAAGTACCTGACAATGGTGCTACTGTTTATGCCATTGCTCAATGTATTGATACTGTCACGCAGAGTGGCTGCCTTGATTGCTTGAAGGTTGGCTACAACAATCTGAAGATTTGTCTTCCCACTTTGGAGGGTAGGGCTTTTGATGCTGGGTGCTTCATGAGATACTCCACTACTTCATTCTTTCCTGATAACCAGACCATTGATCTCACAACCTTCTTGAAACAAGGTTCAAGCAAGAGGGGAGCAATAATTGGTGGGGTTGTAGGAGGTGTAGCTTTTGTTTTGACTGTCCTTGCAGGGTTTCTTTTGGTTACAAAATACAAGAAGCCAAAGGTTCCTAGAGTGATAGGCGACATATTGGGAGCAACAGAGTTGAAAGGTCCGGTTAATTACAGGTATAAGGATTTGAAGATTGCAACAAAAAATTTTAGTGAAGAAAATAAACTGGGGGGAGGAGGATTTGGTGATGTATACAAGGGCACACTTAAGAATGGGAAGATAGTTGCAGTCAAGAAATTAGCTTTAGGCAACACCATAAAGATAGAAGAAGATTTTGAGAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGGCTTTTGGGGTGTTGCAGTAAAGGCCAAGAGAAGATCCTCGTCTATGAATACATGAAAAACAACAGTCTTGACAAATTCTTATTTGATAAAAACAAAGGTTCCCTCAACTGGAAGCAACGGTATGAAATAATCTTAGGCACCGCAAGAGGTTTGGCCTATTTACATGAGGAATTCTATGTTTGCATCATACATAGAGATATAAAGACCAGCAACATACTCTTAGATGATGATCTTCAGCCTAGAATTTCTGATTTTGGGTTGGTTAGACTTCTACCTACGGACCAATCTCATCTTAGCACAAAGTTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATTCAAGGCCAATTATCAGAGAAGGCCGACACCTATAGTTATGGAGTTGTACTTCTAGAAATCATCAGCGGCCAAAAAAGTATTGAATTAAAGGTTGATCCTGATGTCGAAGGCGAATTCCTCCTTCAACAAGCCTGGAAACTATATGTGAAAGGCATGCACTTAAAGTTGGTGGATAACAGCTTAGACCCTAATGACTATGATCAAGAAGAGATGAAGAAAATCGTAGAGATTGGTTTGCTTTGTACCCAAGCATCTCCTGCAATAAGGCCAACAATGTCTGAAGTTGTTCTTATGCTTAGAAGCAAGAGCTTATTGGAGCACATGAAACCCACTATGCCTGTCTTTATTGAAACTAATTTGAGGTCTAGGGATGGCACCTTAACCTCAACTTCTTTCCTTAATTCCGATGCTACAGCCTCCACTACGACACTATCAGCGAGATGA 1959 0.4324 MLQPRRNLLLLFATFIFWSCCSSFNGVVSDPQTHLLNSGCSQYNVSSLASFNDNLNATFRNLRDQVSNQRKLFATAQQVNGGSPFYALFQCRNYLSAADCASCFDIAAAQIRNCSAGANGARVIYDGCFLRYESSSFYDQTTQPGNSMVCGNQTSRDNTTFDAAVEQVLINLQTATPRITGFFAATKTQVPDNGATVYAIAQCIDTVTQSGCLDCLKVGYNNLKICLPTLEGRAFDAGCFMRYSTTSFFPDNQTIDLTTFLKQGSSKRGAIIGGVVGGVAFVLTVLAGFLLVTKYKKPKVPRVIGDILGATELKGPVNYRYKDLKIATKNFSEENKLGGGGFGDVYKGTLKNGKIVAVKKLALGNTIKIEEDFESEVKLISNVHHRNLVRLLGCCSKGQEKILVYEYMKNNSLDKFLFDKNKGSLNWKQRYEIILGTARGLAYLHEEFYVCIIHRDIKTSNILLDDDLQPRISDFGLVRLLPTDQSHLSTKFAGTLGYTAPEYAIQGQLSEKADTYSYGVVLLEIISGQKSIELKVDPDVEGEFLLQQAWKLYVKGMHLKLVDNSLDPNDYDQEEMKKIVEIGLLCTQASPAIRPTMSEVVLMLRSKSLLEHMKPTMPVFIETNLRSRDGTLTSTSFLNSDATASTTTLSAR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1245 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 86 632 - -
Alju07g1245 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Alju07g1245 652 SMART serkin_6 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1245 652 CDD STKc_IRAK 337 604 - -
Alju07g1245 652 Gene3D - 146 248 IPR038408 -
Alju07g1245 652 Gene3D - 32 137 IPR038408 -
Alju07g1245 652 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Alju07g1245 652 FunFam Cysteine-rich receptor-like protein kinase 2 32 137 - -
Alju07g1245 652 FunFam Cysteine-rich receptor-like protein kinase 2 296 407 - -
Alju07g1245 652 Gene3D Phosphorylase Kinase; domain 1 308 407 - -
Alju07g1245 652 Pfam Protein tyrosine and serine/threonine kinase 334 602 IPR001245 GO:0004672|GO:0006468
Alju07g1245 652 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Alju07g1245 652 FunFam Cysteine-rich receptor-like protein kinase 2 145 248 - -
Alju07g1245 652 Gene3D Transferase(Phosphotransferase) domain 1 408 617 - -
Alju07g1245 652 Pfam Salt stress response/antifungal 150 245 IPR002902 -
Alju07g1245 652 Pfam Salt stress response/antifungal 43 134 IPR002902 -
Alju07g1245 652 Coils Coil 52 72 - -
Alju07g1245 652 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Alju07g1245 652 FunFam Cysteine-rich receptor-like protein kinase 2 408 612 - -
Alju07g1245 652 SUPERFAMILY Protein kinase-like (PK-like) 313 604 IPR011009 -
Alju07g1245 652 ProSiteProfiles Protein kinase domain profile. 331 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1245 Alju-ChrAlju07 36866794 36878181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1245 7 652 Receptor kinase-like Gene Family AT1G70520 37.690 2.61e-134 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1245 PK_Tyr_Ser-Thr 6.8e-50 CL0016