Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1239 ATGCTCTTGCTTCCACCTTCTGTTACTCTCCTTATTCCCTTATTCACTACCTTCATATCCTTAAACGGCGTCGTTTCTGACCCCCAGACCCATCTTCTCAACACCGGTTGCTTCCAGTACAATAGATTAGATCCAGCAGATGCTAATTCCTTCAATCAAAGCCTAAACGCAGCGTTTCAAGATCTCTCCAACCAGAACAAGCACTTTGCCACAGCCCAGCAAGCCACCGGAGCCACTCCCGTTTTCGCTCTTTTTCAGTGCAGAAGCTACCTCTCTGCCGCCGACTGTGCCAACTGCTTCTCCGCCGTTGCCGCTCAAATCCACCGTAATTGTTCCGCCGGCACCAACGCCGCCCGTGTCATCTACGACGGCTGCTTCCTCAGGTACGAGAGCAGCAATTTCTTTGACCAAGCAACAGGGTCTTTCAATTCTGCGTCTTGTGGAAATCAGACAGCAGAAGGAAGCACAGCATTATTTAACTCAATCATTCAACAAGTACTAATGAATCTTCAAACAGAAACACCCAGAATCACAGGTTTCTCTGCAGCCACAAAGACGCAAGTACCTAATAATAACAACACAAACATTTATGCCTATGCACAATGTACTGAAAGTATCTCTCAAAGTGGGTGCGATGATTGCTTGAAACAAGGCTACAACACTATACAGACTTGTCTTCCCAATTCAGATGGTAGGGCTTTTGATGCTGGGTGTTTCATGAGATACTCAACCACTTCCTTCTTTGCTGATAACCAGACCATCAATATCACACCCTTCTCCAAACAAGGTTCAAGTAACAAAAAAGGGGCCATTATTGGTGGAGTAGTTGGTGGTGTGGCTCTTGTTTTAGTGCTCTTTTCACTATTTGCCTGGTGGATGCATGTTAGACAGTCAAAAAGGTCTAAAAGGGTTCCAAGAGGTGAGATAATGGGAGAATCCAAGTTGAGAGCCCCACTTAATTACAATTATAAGGAATTGAAGTCTGCCACCAAGAATTTCAGTGAAAAGAATAAATTAGGAGAAGGAGGATTTGGTGCTGTATACAAGGGAACTTTAAAAAATGGAAAAACAGTTGCAGTCAAGAAACTTGTTATGCGACAATCCAACAGGATGGACGAGGAATTTGAGAGTGAAGTGAGGCTAATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTAGGATGCTGCAGTAAAGGCAACAAGAGAATTCTCGTTTATGAATACATGAAAAACACCAGTCTCGACAGATTCTTATTTGGCAGCAATAAAGGTTCTCTCAATTGGAAGCAACGATATGATATAATCTTAGGCGTAGCAAGGGGTTTGACCTACCTACATGAAGAATTTCACATTTGTATTATACATAGAGATATAAAGACTAACAACATTCTCCTTGATGATGATTTCCAACCTAAAATTGCTGATTTTGGGTTGGCAAGACTTTTACCCGGAGATCAGACTCATCTTAGCACTAGATTTGCAGGAACATTGGGATACACAGCACCTGAATATGCAATTCATGGACAGTTATCAGAGAAAGCTGATACCTACAGCTATGGTGTTATAGTCTTAGAAATCATTAGTGGCCAGAAGAGTAGCGAACTAAAAGTTGATGCTCATGCTGATGGCGAATTCCTCCTTCAACAAGCATGGAAACTATATGAGAAAGGCATGCACTTAGGGTTGGTGGACAGTACCTTAGACCCTAATGAGTATGATTCAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACACAAGCATCTCCTGCAATAAGACCAACAATGTCTGAAGTTGTTGTTTTGCTGCAAAGTAATGAAGGCTTATCAAAGAATATGAGACCCACCAGGCCTCTCTATGTTGATACCGATTCAATTTCATCAGGGTTCAAGGGAGACACGTCTACCTATACTGCTTCCAATTCCAATGCTACTATCTCTACTTCCATGATATCAGCAAGATCATGA 1977 0.4213 MLLLPPSVTLLIPLFTTFISLNGVVSDPQTHLLNTGCFQYNRLDPADANSFNQSLNAAFQDLSNQNKHFATAQQATGATPVFALFQCRSYLSAADCANCFSAVAAQIHRNCSAGTNAARVIYDGCFLRYESSNFFDQATGSFNSASCGNQTAEGSTALFNSIIQQVLMNLQTETPRITGFSAATKTQVPNNNNTNIYAYAQCTESISQSGCDDCLKQGYNTIQTCLPNSDGRAFDAGCFMRYSTTSFFADNQTINITPFSKQGSSNKKGAIIGGVVGGVALVLVLFSLFAWWMHVRQSKRSKRVPRGEIMGESKLRAPLNYNYKELKSATKNFSEKNKLGEGGFGAVYKGTLKNGKTVAVKKLVMRQSNRMDEEFESEVRLISNVHHRNLVRLLGCCSKGNKRILVYEYMKNTSLDRFLFGSNKGSLNWKQRYDIILGVARGLTYLHEEFHICIIHRDIKTNNILLDDDFQPKIADFGLARLLPGDQTHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVIVLEIISGQKSSELKVDAHADGEFLLQQAWKLYEKGMHLGLVDSTLDPNEYDSEEVKKIIEIGLLCTQASPAIRPTMSEVVVLLQSNEGLSKNMRPTRPLYVDTDSISSGFKGDTSTYTASNSNATISTSMISARS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1239 658 FunFam Cysteine-rich receptor-like protein kinase 2 410 614 - -
Alju07g1239 658 Pfam Salt stress response/antifungal 147 244 IPR002902 -
Alju07g1239 658 Pfam Salt stress response/antifungal 47 131 IPR002902 -
Alju07g1239 658 CDD STKc_IRAK 339 607 - -
Alju07g1239 658 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Alju07g1239 658 FunFam Cysteine-rich receptor-like protein kinase 2 142 247 - -
Alju07g1239 658 FunFam Cysteine-rich receptor-like protein kinase 2 297 409 - -
Alju07g1239 658 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 631 - -
Alju07g1239 658 SMART serkin_6 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1239 658 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Alju07g1239 658 SUPERFAMILY Protein kinase-like (PK-like) 316 606 IPR011009 -
Alju07g1239 658 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
Alju07g1239 658 Pfam Protein kinase domain 333 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1239 658 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1239 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Alju07g1239 658 Gene3D Phosphorylase Kinase; domain 1 293 409 - -
Alju07g1239 658 Gene3D - 32 134 IPR038408 -
Alju07g1239 658 Gene3D - 139 247 IPR038408 -
Alju07g1239 658 Gene3D Transferase(Phosphotransferase) domain 1 410 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1239 Alju-ChrAlju07 36769734 36776316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1239 8 657 Receptor kinase-like Gene Family AT1G70520 35.897 4.59e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1239 Pkinase 7e-51 CL0016