Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1238 ATGCCTCAACCTTTTACTCTCCTTCCTCTTCCCTTGCTTATTACTATCTTCTTCATATTCTGGTCATGTCGGTCCCTTGACGGCGTCGTTTCTGACCCCCAGATCAATCTTCTAAGTCGTTCTTGCCTCCAATATAACAGAGATGAATATGATACTAAGTCCTTCAATGACAGCGTAAGCGCAACATTTAGTGACCTCACATATCAAGTGGTGAACAAGAGCAGGTTCTTCACCACGGCGCAGCAGACCGACGGAGACCACCCGGTTTACGCTATGTTTCAGTGCAGAAGCTACCTCTCCGCCTCCGACTGTGCCGCTTGCTTCACCCATGCCGCCGCAGAAATCCGCAACTGCTCCTCCGGGACTAACTTTGCTCGTGTCATCTATGACGGCTGCTTCCTCAGGTATGAGAGCACCAATATTCTTGAGCAGACAAGTGGAATTTACAATACTGCATCGTGTGGAAATCAAAGTACTGTAGAAGCAGACACATCATTTTCTTCAGCTGCACAACAACTGCTAATGAATATTGAAACAGCAACACCCAAAATCTCTGGTTTCTCTGCAGCCACAAAAACTCAAAATGGTCCAACTATTATTTATGGCTATGCTCAGTGTACTGAAACTATCTCACAGAGTGGGTGTGAGGATTGCTTGAAGCAAGGGGTCAACAATGTACTGACTTGTCTTCCTAATTCAGAGGGTAGGGCTTTTGACGCTGGTTGTTACATCAGATACTCCACAACTTCCTTCTTTCCTGATAACCTGACCATTTACATCCCTAATCCCTCAGTCAAACAAGCTGGTTCAAGCAAGAAGATCATTATTGGTGTAATTGTTGGAGTGGTAGCTTTTGTTTTGGTCCTCCTTACTCTACTGGCTTATATCAGACGACCAAAAAGGCATGAGAGAGTTCCAAGAGGCAAAACGAAGGGTTCTCTTGGTTGGAAGCAACGATATGATATAATTTTAGGAACGGCAAGGGGTTTAGCTTATCTACATGAAGAATATCATGTTCGTATCATACATAGAGATATAAAGACTAACAACATCCTTTTAGACGATGATTTACAACCTAGAATTTCTGATTTTGGCTTGGCAAGGCTTTTACCGGAGGAGAAAACTCATCTTAGTACAAAAGTTGCCGGAACATTAGGATACACAGCTCCAAAGTATGCAATTCATGGTCAATTATCAGAAAAGGCTGATATCTATAGCTTTGGTGTTGTTGTCCTAGAGATCATCAGTGGTGAACGAAGTAATGAATTAAAAGTTGATGGTGATGATGAAGGTGAATTCCTCCTTAGAAAGGCTTGGAAACTATATGAAAGAGGCATCCACGTGGAGCTGGTGGACAAAACCTTAAACCCTAATGATTATGAGGCAGAGGAAGTAAAAATAATAATAGAAATCGGTTTGCTTTGCACCCAAGCATATGCTGAATCAAGGCCAACAATGTCTGAAGTAGTTGTTTTGCTCCAAGAGAAGGGCTTAGCGAAGAACATAAAACCCACAATGCCTATTTTGATTGAAGCTAATTAA 1542 0.4235 MPQPFTLLPLPLLITIFFIFWSCRSLDGVVSDPQINLLSRSCLQYNRDEYDTKSFNDSVSATFSDLTYQVVNKSRFFTTAQQTDGDHPVYAMFQCRSYLSASDCAACFTHAAAEIRNCSSGTNFARVIYDGCFLRYESTNILEQTSGIYNTASCGNQSTVEADTSFSSAAQQLLMNIETATPKISGFSAATKTQNGPTIIYGYAQCTETISQSGCEDCLKQGVNNVLTCLPNSEGRAFDAGCYIRYSTTSFFPDNLTIYIPNPSVKQAGSSKKIIIGVIVGVVAFVLVLLTLLAYIRRPKRHERVPRGKTKGSLGWKQRYDIILGTARGLAYLHEEYHVRIIHRDIKTNNILLDDDLQPRISDFGLARLLPEEKTHLSTKVAGTLGYTAPKYAIHGQLSEKADIYSFGVVVLEIISGERSNELKVDGDDEGEFLLRKAWKLYERGIHVELVDKTLNPNDYEAEEVKIIIEIGLLCTQAYAESRPTMSEVVVLLQEKGLAKNIKPTMPILIEAN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1238 513 SUPERFAMILY Protein kinase-like (PK-like) 311 493 IPR011009 -
Alju07g1238 513 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Alju07g1238 513 ProSiteProfiles Gnk2-homologous domain profile. 148 251 IPR002902 -
Alju07g1238 513 Pfam Protein kinase domain 310 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1238 513 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Alju07g1238 513 Pfam Salt stress response/antifungal 48 138 IPR002902 -
Alju07g1238 513 SMART serkin_6 274 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1238 513 Gene3D Transferase(Phosphotransferase) domain 1 298 504 - -
Alju07g1238 513 ProSiteProfiles Protein kinase domain profile. 146 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1238 513 FunFam Cysteine-rich receptor-like protein kinase 2 149 251 - -
Alju07g1238 513 Gene3D - 36 140 IPR038408 -
Alju07g1238 513 Gene3D - 148 251 IPR038408 -
Alju07g1238 513 FunFam Cysteine-rich receptor-like protein kinase 2 301 501 - -
Alju07g1238 513 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 288 - -
Alju07g1238 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1238 Alju-ChrAlju07 36720783 36725184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1238 314 493 Receptor kinase-like Gene Family AT1G56120 54.696 4.59e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1238 Pkinase 3.8e-25 CL0016