Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1232 ATGCTCCCACATTTTAATCTTCTTCCCTTATTCATTATCTTCATATTCTGGTCATGTTGCACTTTTGACGGCGTCGTTTCAGACCAACAGATTCATCTTCTTAGTGCTCAGTGCAACCCACCGGACTTCTTCCTCGTTTCCGACCCCTCAATCCTCACTATAAACCTAAACGCAACATTTCAGGATATCAGAGCCCAAATCAGGGATCAGAATAAGCACTTAGCCACAGCACAACAAGGCAGTGGAGAAAATTTCCCAGTTTACACACTTTTCCAGTGTAGAAACTACCTTTCCGTCGCTGACTGTGCTGCCTGCTTCGAGGTCGCCGCCTTACAGATCCGCAAGTGCGCTACCGCCGGCTCCCCCTCCCCGGGTGCCTACGCCGTCTATGATGGCTGCTTCATCAGGTACAACTATAACACCTTCTTTAACGAGGCAACGAATGCTTTCAGTGGTGTATCATGTGGGAACGAGACTATGGGAAGGGCCTCTGAATTTACCGAAGCAACGCAACAAGTACTAACGAGTCTCGAAATATCAACACCTACAATCCCTAGTTTCTTTGGGGCCACGAAGATTCAGGCTCCGAATAATGGTTCAACTATTTATGCCTTTGCTCAATGTGTTGATACTATCACAACAAGTGGGTGCCAAGATTGCTTGAAGACTGGGTACAGTAATTTGCAGATTTGTCTTCCCTTTTCAGATGGCAGGGCTTTTGATGCAGGCTGTTTCATGAGATATTCGACCACTTCCATTTTTCCTAATAACCAAACAATTGATATCACACTCTTTGTCCAAAAAGGTTCTTCAGGGAACAAAGGGTCAACTATTGGTGGAGCTGTTGGAGGTGTAGCCCTTGCTTCGATCCTCCTTGCATTATTTGCCTGGATTAAACGACAAAAAAGCAACAAGACGGTTCCTAGAGGAAACCACTTACGAAGCGACTTAACAGGAGTAAGCAAGTTAAAAGGCCCAGTTACTTACAGTTATAACGATTTGGTGCTTGCAACAAAAAATTTTAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGGGCTGTATTCAAGGGCACTTTGAAGAATGGAAAAGTTGTTGCAGTCAAGAAATTGACTTCATACCAATCCAAGAGAGTGGAGGAAGAATTTGAAAGTGAAGTGACACTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTTCTGGGATGTTGTAGTAAAGGCTACAATAAAATCCTTGTCTACGAATACATGAAAAACAGCAGTCTTGATAGATTCTTATTTGGTAAAAAACAAGGTTCTCTAAATTGGAAGCAGCGATATGACATAATTTTAGGAACAGCAAGAGGTTTGACTTATCTAAATGAGGAATTTCATGTCCGTATCATACATAGAGATATCAAGACTAATAACATCCTCTTAGATGATGATCTACAACCTAGAATTGCTGATTTTGGACTAGCAAGATTTTTACCAGAGGACAAAACCCATATAAGTACGAGAATCGCAGGAACATTAGGATACACTGCACCAGAGTATGTAATTTATGGCCAATTATCGGAGAAAGTTGATGTCTATAGCTATGGTGTTGTAGTTTTGGAAATCATCAGTGCTCAAAAGTGCAGGGAATTAAATGTTGAAAGTGACGATGAAGGGGCATTCCTTCTTCAAAAAGCTTGGAACCTATATGAGAAAGGAAGGCATTTAGAGTTGGTGGACAAGACCTTAGACCCTAAAGGTTATGATGCAGAAGAAGTGAGGAAAACCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCTGATACAAGGCCAATGATGTCTGAAGTAGTTGCTTTGCTTCAAAACAAGGATTTATCAGAGAACATAAGGCCTACTATGCCTATCTTGATAGAAACTAATTAG 1905 0.4142 MLPHFNLLPLFIIFIFWSCCTFDGVVSDQQIHLLSAQCNPPDFFLVSDPSILTINLNATFQDIRAQIRDQNKHLATAQQGSGENFPVYTLFQCRNYLSVADCAACFEVAALQIRKCATAGSPSPGAYAVYDGCFIRYNYNTFFNEATNAFSGVSCGNETMGRASEFTEATQQVLTSLEISTPTIPSFFGATKIQAPNNGSTIYAFAQCVDTITTSGCQDCLKTGYSNLQICLPFSDGRAFDAGCFMRYSTTSIFPNNQTIDITLFVQKGSSGNKGSTIGGAVGGVALASILLALFAWIKRQKSNKTVPRGNHLRSDLTGVSKLKGPVTYSYNDLVLATKNFSEENKLGEGGFGAVFKGTLKNGKVVAVKKLTSYQSKRVEEEFESEVTLISNVHHRNLVRLLGCCSKGYNKILVYEYMKNSSLDRFLFGKKQGSLNWKQRYDIILGTARGLTYLNEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARFLPEDKTHISTRIAGTLGYTAPEYVIYGQLSEKVDVYSYGVVVLEIISAQKCRELNVESDDEGAFLLQKAWNLYEKGRHLELVDKTLDPKGYDAEEVRKTIEIGLLCTQASADTRPMMSEVVALLQNKDLSENIRPTMPILIETN 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1232 634 CDD STKc_IRAK 347 616 - -
Alju07g1232 634 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 88 630 - -
Alju07g1232 634 Pfam Salt stress response/antifungal 55 138 IPR002902 -
Alju07g1232 634 Pfam Salt stress response/antifungal 159 250 IPR002902 -
Alju07g1232 634 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Alju07g1232 634 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Alju07g1232 634 ProSiteProfiles Gnk2-homologous domain profile. 31 142 IPR002902 -
Alju07g1232 634 CDD TM_EGFR-like 271 305 - -
Alju07g1232 634 Gene3D Transferase(Phosphotransferase) domain 1 418 626 - -
Alju07g1232 634 FunFam Cysteine-rich receptor-like protein kinase 2 306 417 - -
Alju07g1232 634 SMART serkin_6 341 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1232 634 FunFam Cysteine-rich receptor-like protein kinase 2 151 253 - -
Alju07g1232 634 FunFam Cysteine-rich receptor-like protein kinase 2 418 622 - -
Alju07g1232 634 ProSiteProfiles Protein kinase domain profile. 341 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1232 634 Gene3D - 31 142 IPR038408 -
Alju07g1232 634 Gene3D - 147 252 IPR038408 -
Alju07g1232 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Alju07g1232 634 ProSiteProfiles Gnk2-homologous domain profile. 148 253 IPR002902 -
Alju07g1232 634 SUPERFAMILY Protein kinase-like (PK-like) 321 614 IPR011009 -
Alju07g1232 634 Gene3D Phosphorylase Kinase; domain 1 305 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1232 Alju-ChrAlju07 36555530 36563292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1232 1 618 Receptor kinase-like Gene Family AT1G70520 36.190 4.40e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1232 PK_Tyr_Ser-Thr 3.7e-48 CL0016