Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1230 ATGCTTCAACCTCCTGATAATAATCTCATTCCATTATTTAGCTTCGTATTCTGGTCATGCTGGACTCTTAACGGCGTCGTTTCAGATCCACAGGCCAATCTCCTTAAGATCCGGTGCAACCCATACGACGGCGTGGTTACCAACGCCTCCATGGTCGAAGAAAACCTAAACGTAACATTACAAGATATCAGACAGAAAATCAGTGATCAAAACAAGCACTTTGCCACCGCGGCGAAGGAGGCCAATGGAGCACCGGTTTACACTATTTTTCAGGGCAGAAACTATATGTCCGTCGCCGACTGTATCACGTGCTTCGATGTGGCCGCTGACCAAATCCGCAGCTGCACCGCCTCCAAGTCCTCTGCTGCCCTTGCCGTGTACGATGGTTGCTTCATCAGGTACAACTCCAATGGCTTCTTTGATGAGGCACCGCAGCCTTTCAACATCGTATCATGTGGAAATCAAACTACAGGAGAAGCAGCAGCTACATTTCACACGACAGTGCAACAAGTGTTAATGAATCTCCAAACAGCAACACCCAGAATCCCAAGTTTATCTGCGGCTACGAAGATTCTTGTCCCAAATAATAATAATAATGGTGCGACGACTATTTATGCGTATGCTCAATGTGTTGAAACTGCCACAATGAACGAGTGCCTTGATTGCTTGAAGGTTGATTACAGTAGCGTGGAGATTTGTCTTCCCAATTCGGATGGTACGGCTTTTGATTATAGTTGTTTCATGAGATACTCCACCACTCCTTTTTTTCCTGATAACCAGACCATTAATATCACAATACCCTCGGTCAAACAACAAGGTTCATCAAGCAAAAAGGGGGCCGTTATTGGTGGAGTAGTTGGTGGTATAGCTCTTGTTCTGATACTCCTTGGATTGTTGTTTGCCTGGATTAGACGACATAAAAAGAATGAGAGAAGTCCTAGAGAAGACATAATAGGAGCAAGCAAGTTGAAAGGCCCAATTACTTACCGTTATTATGATTTGATGTCGGCAACCAACAATTATAGTGAAGAAAATAAACTAGGAGAGGGAGGATTCGGGGCTGTATACAAGGGCACTTTGAAGAATGGGAAAGTTGTTGCAGTCAAGAAAATGACCTTAAAAGATTCCAACAGGATGGATGAAGATTTTGAAAGTGAAGTGACGCTTATTAGTAATGTTCATCATCGCAATCTTGTTCGACTTCTGGGATGTTGTTCTAAAGGCCCTGACAGAATCCTTGTTTATGAATACATGAAAAATAGCAGCCTTGACAACTTCTTATTCGGGGAAAGAAGAAAAGATTTTGGGCTGGCAAGGCTCTTACCCGATCACAAATCTCATCTTAGCACAAGAATTGCCGGAACATTGGGATACACAGCACCAGAGTATGCAATTCACGGCCAATTATCAGAAAAAGTTGATATTTACAGTTATGGTGTTGTCGTCTTAGAAATCGTTAGTGGTCAGAACTGCACAGAATTAAAACTCGACAGTGATGATGAAGGGGCATTCCTCATTCAAAAGGCATGGAAACTCTATGAGAAAGAAAAACACTTGGAGTTAGTCGATAAGGCCTTGGACCCTAACGAGTATGATGCAAAAGAAGTGAAGAAAACCATAGAGATTGGTTTGCTTTGCATCCAAGCATCTGCGGATGCAAGGCCAATGATGTCAGAAGTAGTTGCTATGCTTCAAAACATGGATTTATTAGAGAACTTGAGACCCTCCATGCCTATCTTGATTGAAATTAATTAG 1755 0.4262 MLQPPDNNLIPLFSFVFWSCWTLNGVVSDPQANLLKIRCNPYDGVVTNASMVEENLNVTLQDIRQKISDQNKHFATAAKEANGAPVYTIFQGRNYMSVADCITCFDVAADQIRSCTASKSSAALAVYDGCFIRYNSNGFFDEAPQPFNIVSCGNQTTGEAAATFHTTVQQVLMNLQTATPRIPSLSAATKILVPNNNNNGATTIYAYAQCVETATMNECLDCLKVDYSSVEICLPNSDGTAFDYSCFMRYSTTPFFPDNQTINITIPSVKQQGSSSKKGAVIGGVVGGIALVLILLGLLFAWIRRHKKNERSPREDIIGASKLKGPITYRYYDLMSATNNYSEENKLGEGGFGAVYKGTLKNGKVVAVKKMTLKDSNRMDEDFESEVTLISNVHHRNLVRLLGCCSKGPDRILVYEYMKNSSLDNFLFGERRKDFGLARLLPDHKSHLSTRIAGTLGYTAPEYAIHGQLSEKVDIYSYGVVVLEIVSGQNCTELKLDSDDEGAFLIQKAWKLYEKEKHLELVDKALDPNEYDAKEVKKTIEIGLLCIQASADARPMMSEVVAMLQNMDLLENLRPSMPILIEIN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1230 584 Pfam Protein tyrosine and serine/threonine kinase 344 428 IPR001245 GO:0004672|GO:0006468
Alju07g1230 584 ProSiteProfiles Protein kinase domain profile. 341 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1230 584 Pfam Protein kinase domain 434 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1230 584 Gene3D Transferase(Phosphotransferase) domain 1 414 575 - -
Alju07g1230 584 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Alju07g1230 584 FunFam Cysteine-rich receptor-like protein kinase 2 305 417 - -
Alju07g1230 584 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 434 578 - -
Alju07g1230 584 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Alju07g1230 584 Gene3D Phosphorylase Kinase; domain 1 306 413 - -
Alju07g1230 584 Pfam Salt stress response/antifungal 47 136 IPR002902 -
Alju07g1230 584 Pfam Salt stress response/antifungal 152 252 IPR002902 -
Alju07g1230 584 FunFam Cysteine-rich receptor-like protein kinase 2 147 255 - -
Alju07g1230 584 SUPERFAMILY Protein kinase-like (PK-like) 325 573 IPR011009 -
Alju07g1230 584 Gene3D Single helix bin 269 305 - -
Alju07g1230 584 ProSiteProfiles Gnk2-homologous domain profile. 146 255 IPR002902 -
Alju07g1230 584 Gene3D - 147 255 IPR038408 -
Alju07g1230 584 Gene3D - 32 139 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1230 Alju-ChrAlju07 36518508 36525045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1230 8 582 Receptor kinase-like Gene Family AT1G70520 31.240 7.91e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1230 Pkinase 1.2e-10 CL0016