Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1225 ATGCTCCAACCTCATCATCATCTTCTTCCCATATTTACCTTCATATTCTGGTCATGCTGGATCCTCAACGGTGTCGTTTCAGACCCCCAGATCTATTTTTTGACCAGAGGGTGCAATCCATACTATGAATTCCTTGTGTCCAACGTTACCCTCTTCGTTGAAAACATAAACTCAACGTTGCGAGACATCAGAGAGCAGATCAGTGGCCAAAACAAGCACTTCGCCACCGCACAGGAAGCTGCCAGTGGCGGAAACACCGTCTCCACACTTTTTCAATGTAGGAGTTACCTCTCAACCGCCGATTGTGTCGCCTGCTTTGACGTTGCTGCGACTCAAATTCTCAGATGTGCTCCCGGCGACCCTGGCGGCCATGTTGTCTATGACGGATGCTACCTCAGGTACGACATTAGTAGAGCTTTCTTTGGTGATACAACACAGTCTGTCAATAGTGCATCATGTGGGAATCAGACTAAAGATCAACCTGCTCCTGTATTTACCTCAGCTGTTCAACAAATGCTAATGAATCTCCAAACAGCAACACCCAAAATCACTGGCTTCTCTGCAGCCACAAAGAAACAAGTGCCTAACAATGGTCCCACTATTTATGGATTTGCTCAATGTATTGAAACTATCTCACAAAGTGACTGCGAGGATTGCTTGAATTCTCAGTACAATAATATGCTGACTTGCCTTCCCAATTCAGATGGTAGGGCTTATGCTAATGGTTGTTTCTTGAGATATTCCACCACTTCCTTCTTTCCTGAAAATCAGACCATTGATATCACACCATCCTTCAAGAAAGGTTCAAGCAATAAGGGAGCCATTATAGGTGGAACTATTGGAGGCGTAGTAGCTCTTGCTTTGACCTTCCTTGCATTATTTGTCTGGATTAGACGACAGAAAAAGCCTAAGAGGGCTCCTAGAGAAGACATAATTGGAGCAAGCAATTTGAAAGGTCCAGTTATTTATGATTATAATGACTTGAAGGCTGCAACGAAGAATTTCAGTGAAGAAAATAAACTAGGAGAAGGAGGATTTGGTGTTGTATACAAGGGCACTTTGAAGACTGGAAAAGAAATTGCAGTCAAGAAATTAACATTTCGCCATTTCAATAGGATGGAGGAGGAGTTTGAAAATGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTAGGCTCATGGGATATTGTATTCATGGAAAGAATAGAATCCTTGTTTATGAATACATGAGAAATAGCAGTCTTGACATGTTCTTATTCGGTAAAATGAAAGGCTCGCTCAACTGGAAGCAAAGATATGACATAATTTTAGGCATGGCAAGGGGACTAGCCTATTTACACGAAGAATTCCACGTTTGCATCATACACAGAGATATAAAGCCTAACAATGTTCTCTTGGATGAGGATCTTCAGCCTAAAATTGCTGATTTTGGATTGGCAAGACTTCTACCTGAAGACAAAACTCATCTTAGTACTAAATTTGCAGGAACATTAGGATACACAGCACCAGAATATATAATTCATGGCCAATTATCTGAGAAGACTGATGTCTATAGTTATGGCGTTGTAATCTTGGAGATTATCGGTGGCCAAAGAAGCAAGGAACTTAGAGTTGATGGTGATATTGAAGGCGAATTCCTCCTTCAGAAAGCTTGGAAGCTATATGAAAAAGGTATGCATGTGGAGCTAGTGGACGAAGCCTTAGACCCTAGTGATTATGATGTGGAAGAAGTGAAGAAAGTCATGGAGGTTGGTTTGCTCTGCACCCAAGCATCCGCTGAAATGAGGCCAACAATGTCTGAAGTAATTGTTTTGCTCCAAAACAAGGACTTGTTAGAGAATAGGAGACCCACCATGCCTGTCTTGATTGAACCAAATTAG 1887 0.4165 MLQPHHHLLPIFTFIFWSCWILNGVVSDPQIYFLTRGCNPYYEFLVSNVTLFVENINSTLRDIREQISGQNKHFATAQEAASGGNTVSTLFQCRSYLSTADCVACFDVAATQILRCAPGDPGGHVVYDGCYLRYDISRAFFGDTTQSVNSASCGNQTKDQPAPVFTSAVQQMLMNLQTATPKITGFSAATKKQVPNNGPTIYGFAQCIETISQSDCEDCLNSQYNNMLTCLPNSDGRAYANGCFLRYSTTSFFPENQTIDITPSFKKGSSNKGAIIGGTIGGVVALALTFLALFVWIRRQKKPKRAPREDIIGASNLKGPVIYDYNDLKAATKNFSEENKLGEGGFGVVYKGTLKTGKEIAVKKLTFRHFNRMEEEFENEVKLISNVHHRNLVRLMGYCIHGKNRILVYEYMRNSSLDMFLFGKMKGSLNWKQRYDIILGMARGLAYLHEEFHVCIIHRDIKPNNVLLDEDLQPKIADFGLARLLPEDKTHLSTKFAGTLGYTAPEYIIHGQLSEKTDVYSYGVVILEIIGGQRSKELRVDGDIEGEFLLQKAWKLYEKGMHVELVDEALDPSDYDVEEVKKVMEVGLLCTQASAEMRPTMSEVIVLLQNKDLLENRRPTMPVLIEPN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1225 628 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Alju07g1225 628 CDD STKc_IRAK 341 610 - -
Alju07g1225 628 SUPERFAMILY Protein kinase-like (PK-like) 319 615 IPR011009 -
Alju07g1225 628 Gene3D Transferase(Phosphotransferase) domain 1 412 620 - -
Alju07g1225 628 Pfam Salt stress response/antifungal 153 249 IPR002902 -
Alju07g1225 628 Pfam Salt stress response/antifungal 49 135 IPR002902 -
Alju07g1225 628 FunFam Cysteine-rich receptor-like protein kinase 2 299 411 - -
Alju07g1225 628 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 626 - -
Alju07g1225 628 ProSiteProfiles Gnk2-homologous domain profile. 33 139 IPR002902 -
Alju07g1225 628 FunFam Cysteine-rich receptor-like protein kinase 2 148 252 - -
Alju07g1225 628 ProSiteProfiles Protein kinase domain profile. 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1225 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Alju07g1225 628 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Alju07g1225 628 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Alju07g1225 628 SMART serkin_6 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1225 628 FunFam Cysteine-rich receptor-like protein kinase 2 412 616 - -
Alju07g1225 628 Gene3D - 145 252 IPR038408 -
Alju07g1225 628 Gene3D - 33 138 IPR038408 -
Alju07g1225 628 Pfam Protein kinase domain 336 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1225 Alju-ChrAlju07 36446075 36451841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1225 7 612 Receptor kinase-like Gene Family AT1G70520 38.065 3.93e-122 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1225 Pkinase 2e-50 CL0016