Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1224 ATGCTTCAATCTTATTTCCTTCCTTTAATCACCTTCATTTTCTGGTCATGGTGGACGATTAACGGCGTCGTTTCGGACCCACAGACCAATCTTGTAAGCAAAGGGTGCACCCCATCTAACTCATTCGTCTTGTCCAACTTCTCCATCTTCAGTGAGAATGTCAACAAAACGCTTCGGCACATCAGAGAGGATGTTCTCAACAAAAGCATGCTTTTTGCGACCGAGCAGAAAGCCAACGCAGAGAATCCCGTTTTCACTCTTTTTCAGTGCAGAAACTACCTCTCCGTTGATGACTGTGTTGCCTGCTTCGACGCTGCCGAGGAACATGTCCGTGAGTGCCCTGCCGGAGCAAAAGGTGGCCGGGTCATCTACGACGGCTGCTTCCTCAGGTACGAGGCAAATGGTTTCTTCAGCCAGACAACGGAGAATTTCAATGCCGTATCGTGTGGTAATCAAAGTGTAAGAGATTCAACCATATCGTTTACCTCAGTTGTGCAACGAGTGCTTATGAATCTCCAAACAACAACACCCAAAAAGCAAGGGTTTTTCGTGGCTACAAAAGCACAATTATTGCCTCATAATAATAATGGTACAACTATTTATGCCTTTGCTCAATGTATTCAAACAATCACACAAAGTGGGTGCGAAGATTGCTTGAAGGCTTGTAATAGTAATATGCAGATTTGCCTTCCTAATTCGGATGGTAAGGCCTTCGCTGCTGGATGCTTCATGAGATACTCCACCACTTCCTTCTTTCCAGTTGATTACCAGACGATTGATCTCACTCCCTTGGGGAAACAAGGTTCAAACAATAAGGGGGCTATTTTTGGTGGAGTTGTTGGAGGTCTAGTTCTTGTTTTGATCCTCCTTATATTATTTGCCTGTATTAGACGGCAAAAATGCACTAAGAGGGTTCATAGAGGAGATATAATTAGAGAAACTAAGCTGAAAGGCCTTGTAACATATAGTTATAAGGATTTGAAGTTTGCAACTAAGAATTTTAGTGAAGAGAACAAACTAGGAGAAGGAGGATTTGGTGCAGTCTATAAGGGCACTTTAAAAGATGGGAAAGAAGTTGCAGTCAAGAAGTTAACTTTACAAAACTCCAGGAGAATGGAGGAAAATTTTGAGAGTGAAGTGATGCTCATAAGTGATGCTCATCATCCAAATCTTGTTCAGCTTCTGGGATGGAGTAGCAAAGACCGTGTTAGAATCCTTGTTTATGAGTACATGAAAAACAACAGTCTTGACAAATTCTTATTTGGTGGAATAAAGAAAGGTTATCTCAACTGGAAGCAGAGATATGACATAATTTTAGGAATAGCAAGAGGCTTGGCTTATCTTCATGAGGAATTTCATGTTTGTATCATACATAGAGATATAAAGACTAACAACATCCTTTTGGACAATGACCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGACTTTTACCTGAGGATAGATCTCATCTTAGCACAAAATTTGCAGGAACGTTAGGATACACAGCACCGGAGTATGCAATTCATGGACAATTATCAGAGAAGGCTGATATCTACAGCTATGGTGTTGTAATCCTTGAAATCATTAGTGGTCAAAGAAGCAAAGCATCAAAGGATGATGGTGATCCTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATACGAGAAGGGCATGCACTTGGAGTTGGTGGACAAGACCTTAGACCCTAATGAGTATGACGCAGAAGAAGTAAAGAAAGTCATAGAGATTGGTTTGCTTTGCACGCAAGCATTTGCTGACTTAAGGCCAACGATGTCTGAAGTAACTGGTTTGCTCCAAAGCAGTAACCTATTAGAGAATATAATAAGACCTTCTATGCCTCTCTTGATTGTAACTAATTAG 1890 0.4106 MLQSYFLPLITFIFWSWWTINGVVSDPQTNLVSKGCTPSNSFVLSNFSIFSENVNKTLRHIREDVLNKSMLFATEQKANAENPVFTLFQCRNYLSVDDCVACFDAAEEHVRECPAGAKGGRVIYDGCFLRYEANGFFSQTTENFNAVSCGNQSVRDSTISFTSVVQRVLMNLQTTTPKKQGFFVATKAQLLPHNNNGTTIYAFAQCIQTITQSGCEDCLKACNSNMQICLPNSDGKAFAAGCFMRYSTTSFFPVDYQTIDLTPLGKQGSNNKGAIFGGVVGGLVLVLILLILFACIRRQKCTKRVHRGDIIRETKLKGLVTYSYKDLKFATKNFSEENKLGEGGFGAVYKGTLKDGKEVAVKKLTLQNSRRMEENFESEVMLISDAHHPNLVQLLGWSSKDRVRILVYEYMKNNSLDKFLFGGIKKGYLNWKQRYDIILGIARGLAYLHEEFHVCIIHRDIKTNNILLDNDLQPRIADFGLARLLPEDRSHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVILEIISGQRSKASKDDGDPEDEFLLPKAWKLYEKGMHLELVDKTLDPNEYDAEEVKKVIEIGLLCTQAFADLRPTMSEVTGLLQSSNLLENIIRPSMPLLIVTN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1224 629 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Alju07g1224 629 ProSiteProfiles Protein kinase domain profile. 334 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1224 629 Pfam Salt stress response/antifungal 149 248 IPR002902 -
Alju07g1224 629 Pfam Salt stress response/antifungal 45 133 IPR002902 -
Alju07g1224 629 FunFam Cysteine-rich receptor-like protein kinase 2 144 251 - -
Alju07g1224 629 FunFam Cysteine-rich receptor-like protein kinase 2 298 410 - -
Alju07g1224 629 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Alju07g1224 629 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 618 - -
Alju07g1224 629 CDD STKc_IRAK 340 604 - -
Alju07g1224 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Alju07g1224 629 Gene3D Transferase(Phosphotransferase) domain 1 411 617 - -
Alju07g1224 629 SMART serkin_6 334 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1224 629 Pfam Protein kinase domain 335 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1224 629 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Alju07g1224 629 Gene3D - 28 136 IPR038408 -
Alju07g1224 629 Gene3D - 141 251 IPR038408 -
Alju07g1224 629 FunFam Cysteine-rich receptor-like protein kinase 2 411 616 - -
Alju07g1224 629 Gene3D Phosphorylase Kinase; domain 1 307 410 - -
Alju07g1224 629 SUPERFAMILY Protein kinase-like (PK-like) 319 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1224 Alju-ChrAlju07 36437845 36441978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1224 6 623 Receptor kinase-like Gene Family AT1G70520 36.349 9.58e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1224 Pkinase 8.7e-49 CL0016