Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1220 ATGCTTCTTCAACCTACTTTCCTTTCTGCAATCTCCTTCATATTTTGGTCATGTTGGACACTTAACGTCGTCGTTTCGGATCCACAGACCCATTTTCTTAACGGACGGTGCTCCCCATCACCCAACACAATCGTCTTGCCCAACTCATCCGTCTTCCATGACACCGTCAACGCAACATTACGAGACATAAAAGAGAAGATCATCTCTCAGAACAAATACTTTGAGACGGCGCGTGAACCCAAAGCAGAAAACCCTGTTTCCACCCTTTTTCATTGTAGAAACTACATCTCCATTTCCGACTGTGTTTCCTGCTTAGACGTCGCTGCCAAACAAACCCGCCGCTGCCCTCTGGCGGCACAAGGTGCCTTTGTTATCTACGACGGCTGCTTCCTCAGGTACGAGACCAATGCTTTCTTTGAGAAGACAACGGAGGATTTCAATGCTGCATCGTGTGGTAATCAAATCGTAGGAGAATCCATTACTACATTTACCTCACTTGTGCAACGAGTTCTAAAGAATCTGCAAACAACAACACCCAAAAAACACGGGTTTTTTGCAGCCATAAAGATAGACTTGCCTCATAAAAATAATAGTACAACTATTTATGCCTTTGCTCAATGTATTGAAACTATCACTCAGAGGGGATGCTTCAATTGCTTGGACACTGGCTATAAAAATATGCAGACTTGTCTTCCAAGTTCGGATGGTAGGGCTTATGCTGATGGGTGTTTCATGAGATACTCCACCTCTTCCTTCTTTCCTCATAATTACCAGATCATTGATTTCTCTTCCTTGGGCAAACAAGGTTCATTTAAAAAGGGGGCCGTTATCGGTGGAGTTGTTGGAGGAGTTACTCTTGTAATAATCCTCCTTGTATTATTCATCTGTATTAGACAATCAAAAAGCTCTAAGAGAGCTCACAGAGGGGACATAGCTATGACAACTATGTTGAAAGGCCTAGTTTCTTATGATTATAAGGATTTGAAGTTTGCAACTCAAAATTTTAGTGAAGAAACTAAACTAGGAGAAGGAGGATTCGGTGCCGTATATAAGGGCACTCTAAGGGACGGGAAAATAGTTGCAGTTAAGAAGTTAACTTTACAACACTCCAAGCAGATGGAGGCAGATTTTTTGAGTGAATTGATGCTTATTAGTGATGCTTATCATCCGAATCTTGTTCAACTTTTGGGATGGTGTTGTAAAGGCCATGTCAGAATCCTTGTATATGAATACATGAAAAACAACAGTCTGGACAAATTCTTATTCGGCGAAAAGAAAGGTTATCTTAACTGGAAGCAACGATATCATATAATTTTGGGGATAGCAAGAGGTTTAACTTATCTCCATGAGCAATTTCATGTTTGTATTATACATAGAGATATAAAGACTAACAACATCCTCTTAGACAACAATCTACAACCTAGAATTGCTGATTTTGGATTGGCAAGGTTTTTACCTGAAGACAAATCTCATCTTAGCACAAAATTTGCAGGAACAATAGGATACACAGCACCCGAGTATGCAATTCATGGGCAGTTATCGGAGAAAGCTGATATTTACAGTTATGGTATTGTAATCCTTGAAATAGTTACTGGTCAGAAAAGCAAAGCATTCATGGATGATGGTGATACTGAAGATGAATTCCTCCTTCCAAAAGCTTGGAAACTATACGAGAGAGGCAAGCACTTAGAGTTGGTGGACAAAGCCTTAGAACCTAATGACTACGATGCCGAAGAAATGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACACAAGCATTTGCTGACTTAAGGCCGACAATGTCTGAAGTGATTGATTTGCTCCAACGCAATGGCTTATTAGAGCATATGAGACCCTCTATGCCTGTCTTAATTGTAACTAATTAG 1887 0.4038 MLLQPTFLSAISFIFWSCWTLNVVVSDPQTHFLNGRCSPSPNTIVLPNSSVFHDTVNATLRDIKEKIISQNKYFETAREPKAENPVSTLFHCRNYISISDCVSCLDVAAKQTRRCPLAAQGAFVIYDGCFLRYETNAFFEKTTEDFNAASCGNQIVGESITTFTSLVQRVLKNLQTTTPKKHGFFAAIKIDLPHKNNSTTIYAFAQCIETITQRGCFNCLDTGYKNMQTCLPSSDGRAYADGCFMRYSTSSFFPHNYQIIDFSSLGKQGSFKKGAVIGGVVGGVTLVIILLVLFICIRQSKSSKRAHRGDIAMTTMLKGLVSYDYKDLKFATQNFSEETKLGEGGFGAVYKGTLRDGKIVAVKKLTLQHSKQMEADFLSELMLISDAYHPNLVQLLGWCCKGHVRILVYEYMKNNSLDKFLFGEKKGYLNWKQRYHIILGIARGLTYLHEQFHVCIIHRDIKTNNILLDNNLQPRIADFGLARFLPEDKSHLSTKFAGTIGYTAPEYAIHGQLSEKADIYSYGIVILEIVTGQKSKAFMDDGDTEDEFLLPKAWKLYERGKHLELVDKALEPNDYDAEEMKKVIEIGLLCTQAFADLRPTMSEVIDLLQRNGLLEHMRPSMPVLIVTN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1220 628 SMART serkin_6 335 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1220 628 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Alju07g1220 628 CDD STKc_IRAK 341 610 - -
Alju07g1220 628 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
Alju07g1220 628 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 620 - -
Alju07g1220 628 ProSiteProfiles Protein kinase domain profile. 335 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1220 628 Gene3D Phosphorylase Kinase; domain 1 296 411 - -
Alju07g1220 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Alju07g1220 628 Gene3D Transferase(Phosphotransferase) domain 1 412 617 - -
Alju07g1220 628 Pfam Protein tyrosine and serine/threonine kinase 338 607 IPR001245 GO:0004672|GO:0006468
Alju07g1220 628 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Alju07g1220 628 Pfam Salt stress response/antifungal 47 135 IPR002902 -
Alju07g1220 628 Gene3D - 33 138 IPR038408 -
Alju07g1220 628 Gene3D - 144 252 IPR038408 -
Alju07g1220 628 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Alju07g1220 628 SUPERFAMILY Protein kinase-like (PK-like) 313 608 IPR011009 -
Alju07g1220 628 FunFam Somatic embryogenesis receptor kinase 1 306 411 - -
Alju07g1220 628 FunFam Cysteine-rich receptor-like protein kinase 2 412 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1220 Alju-ChrAlju07 36346993 36351514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1220 5 609 Receptor kinase-like Gene Family AT1G70520 36.084 3.20e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1220 PK_Tyr_Ser-Thr 1.1e-49 CL0016