Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1217 ATGACCATCTTCTTCTTCAACCAAAAGATGCTTCAGCGTCCAGGTCTGCTGGTTCTCTTAGTGATCAACTTCATATTCTGTTCAAGCTGGACTCTTAACTGCGTCGTTTCGGACCCACAGACGAACCTTCTGCACAGTGGGTGCAGCCCGTTCTACGAATTTGTCTTGTCCAACTTCTCGACGTTCAGCGAAAACATCAACACAACGTTTAGAGAAATCAGAAAGGAGATCGTGACTCAGAACAAGTACTTCGCCACGGAGCAGCAAGGCAGCGGAGACAACCCAGTTTCCACTCTTTTTCAATGCAGAAATTACCTCTCCATACCCAACTGTGTCGCCTGCTTCGATCTCGCTTCTGTTCAAATCCGCAACTGCTCCATCGGAGCACACGGTGCCCGTGTGGTCTACGATGGCTGCTTCCTCAGGTATGAGACCAGTGCTTTCTTTGACCAAACGACGGCGACGTTTAATAATGCCGGATCATGTGGCGTGAAACTGACTAATAATGGAGAAGCTTCTACATTTACTTCATCTGCACAAGAACTGCTAATGAAACTCCAAACGACAACACCAAAAGTCAGGGGTTTTTCCGCAGCCATGAAGACAAAAGTGCCTAATAATAATGGTACAACTATATATGCCTTTGCTCAATGTATTGAAACAATCTCACAAAGTGGATGCTCGAGTTGCTTAAACGCTGCGTCTAGCAATATGCCAACTTGTCTTCCCAGTTCAGATGGTAGGGCTTATGCTGATGGCTGTTTCATGCGATTCTCCACTTCTTCCTTCTTTCCTGATAACCAGACCATCGATATCACTCCCATGAAAAAACAAGGTTCAAGCAAGAAAGGGTCCATCATTGGCGGAGCTGTTGGAGGTGTAGCTTTTCTTTTGGTACTTCTTGCATTATTAGCCTGGATCAGACGACCAAAAACCCCTAAGCAAGTTCCGAGAGGAGAGATAACTGGAGCAAGCAAGTTAGCCCGCCCAGTTACTTACAGTTATAAGGATTTGAAGTTTGCAACCAAGAATTTTAGTGAAGAAAATAAAGTAGGAGAAGGAGGGTTTGGAGCTGTATACAAGGGTACTCTGAAAAATGGGAAAGTGGTTGCAATCAAGAAATTAAATTTTCGCCAATTCACGAGGATGGAGGAAGATTTTGAGAGTGAAGTGAAGCTGATAAGTAATGTTCATCATCTAAATCTTGTTCGACTTCTTGGATGTTGCAGTAACGGTGACAACAGAATTCTTGTTTATGAATACATGAAAAATAAAAGTCTCGACAATTTCTTATTTGGTAAAAAGAAGGGTTCTCTCAGCTGGAAGCAACGATGTAACATAATTTTGGGAACAGCAAAGGGGTTGGCTTATTTGCATGAGGAGTTTCATGTTCGTATCATACATAGAGATATAAAAACTAACAATATCCTCTTAGATGATAATCTACAGCCTAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTACCTGAGGACAAATCTCATCTCAGCACTAAATTTGCAGGAACATTGGGATACACGGCACCTGAATATCTTATTCATGGCCAATTATCAGAGAAGGCTGACATCTATAGTTATGGCGTTGTAGTCTTGGAAATTGTTAGCGGTCGACAAAGTAAAGAATTAACCATCGCTGGCGATGCTGAGGGTGAATTCCTCCTCCAAAAGGCTTGGAAATTATATGAGAGAGGCATGCACCTAGAGTTGGTGGACAATACCTTAGACCCTACTGAGTATGATGCAGAAGGAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACTCAAGCATCTACTGAGGCAAGGCCACTGATGTCTGAAGTAATTGTTTTGCTCCAAAACAAGGATTTATTAGAGAATATGAAGCCCACTATGCCTATCTTGATTGAAACTAATTAA 1917 0.4231 MTIFFFNQKMLQRPGLLVLLVINFIFCSSWTLNCVVSDPQTNLLHSGCSPFYEFVLSNFSTFSENINTTFREIRKEIVTQNKYFATEQQGSGDNPVSTLFQCRNYLSIPNCVACFDLASVQIRNCSIGAHGARVVYDGCFLRYETSAFFDQTTATFNNAGSCGVKLTNNGEASTFTSSAQELLMKLQTTTPKVRGFSAAMKTKVPNNNGTTIYAFAQCIETISQSGCSSCLNAASSNMPTCLPSSDGRAYADGCFMRFSTSSFFPDNQTIDITPMKKQGSSKKGSIIGGAVGGVAFLLVLLALLAWIRRPKTPKQVPRGEITGASKLARPVTYSYKDLKFATKNFSEENKVGEGGFGAVYKGTLKNGKVVAIKKLNFRQFTRMEEDFESEVKLISNVHHLNLVRLLGCCSNGDNRILVYEYMKNKSLDNFLFGKKKGSLSWKQRCNIILGTAKGLAYLHEEFHVRIIHRDIKTNNILLDDNLQPKIADFGLARLLPEDKSHLSTKFAGTLGYTAPEYLIHGQLSEKADIYSYGVVVLEIVSGRQSKELTIAGDAEGEFLLQKAWKLYERGMHLELVDNTLDPTEYDAEGVKKIIEIGLLCTQASTEARPLMSEVIVLLQNKDLLENMKPTMPILIETN 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1217 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Alju07g1217 638 ProSiteProfiles Gnk2-homologous domain profile. 157 263 IPR002902 -
Alju07g1217 638 FunFam Cysteine-rich receptor-like protein kinase 2 422 626 - -
Alju07g1217 638 Gene3D Phosphorylase Kinase; domain 1 319 421 - -
Alju07g1217 638 ProSiteProfiles Gnk2-homologous domain profile. 41 148 IPR002902 -
Alju07g1217 638 Gene3D Transferase(Phosphotransferase) domain 1 422 630 - -
Alju07g1217 638 Pfam Salt stress response/antifungal 165 260 IPR002902 -
Alju07g1217 638 Pfam Salt stress response/antifungal 58 145 IPR002902 -
Alju07g1217 638 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 100 636 - -
Alju07g1217 638 FunFam Cysteine-rich receptor-like protein kinase 2 312 421 - -
Alju07g1217 638 Pfam Protein kinase domain 346 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1217 638 SUPERFAMILY Protein kinase-like (PK-like) 328 618 IPR011009 -
Alju07g1217 638 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1217 638 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Alju07g1217 638 CDD STKc_IRAK 351 620 - -
Alju07g1217 638 Gene3D - 47 148 IPR038408 -
Alju07g1217 638 Gene3D - 160 263 IPR038408 -
Alju07g1217 638 SMART serkin_6 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1217 Alju-ChrAlju07 36239264 36244458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1217 31 636 Receptor kinase-like Gene Family AT1G70520 37.055 1.58e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1217 Pkinase 2.5e-51 CL0016