Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1212 ATGGTACTGCGACACCTGCAACAAAAGCCCATCTTCTTTATCTTGTTGAGCTTCACAATCTGGTCATGGGGGACTCTCGACGGCGTCGTTTCAGAGCCTCAGACGGTTCTTGTGACGGTAGGGTGCAGCCTAGACAACGTCAGTGACGCGTCCATCTTCCAAAGCAATCTAAACGCAACGTTTCGATCCATGAGAACGAAGATCAGCAATCAAAGCACACACTTCGCCACGGAGCAGGTAGTGAGGGGGAACAACCCTACTTATGGCCTTTTTCAGTGCAGAAACTACCTCTCCATCGCCGACTGTCTCACTTGCTTCGACGTCGCCGACAATGAGATCCGACACAACTGCTCCGCCGCCTCCAACGGTGCCCACATCATATACGACGGTTGCTTCCTCAGGTACGAGAGCAGCAGCTTCTTTGAGCAGTCCACAGACCCAGTGAACAACATTCATTGTGGGAATCAAACAAGAAATTCCACTGAACTTGCTTCAACTGTACAACAAGTACTAAGGAATATGGAATTAGCAACTCCAAGAATCGCTGGTTACTTTGCAGCCACTAAAACGACAGTGCCTAACAGTAATGGTTCAAACATTTATGCCTTTGCTCAATGTGTTGAAACTCTCACACAAAGTGGTTGTGACAATTGCTTGAACATTGCCATAAGGAATTTCCAGATTTGTCTCCCAAATTCAGATGCTAAGGCTTTTGATTTTGGGTGCTTCATGAGATACTCCACCACTGCCTTCTTTGCTGATAATCAAACCATTGATATCAATCACTTCTTGAATCCAGGAGATTCAAGCAAGAAGAAGGCCATTATTGGTGGAGTTGTGGGAGGAGCATCTTTTATACTGATTCTCCTTGCATTAATTGCTTTGTATATGCGATCACAGTCATCCAAGATGGTTCCTAAAGGTGACATTTTGGGAGCAACTGAATTAAAAGGTCCTGTTATCTTTAGGTATAAGGATCTAAAGTCAGCGACAAAAAATTTCAGTGAAAAAAATAAAATAGGAGAAGAAGGTTTTGGTGATGTATACAAGGGTACCCTAAAGAATGGAAAAGTAGTTGCTATCAAGAAATTGGATTTAGGGCAATCCAAACAGATGGAGAAAGATTTTGAGAGTGAAGTGAAGTTGATAAGTAATGTTCATCATCGGAATATTATTAGGCTTCTGGGATGTTGCAGTAAAGGCCAAGAGAGATTTCTTGTTTATGAGTACATGAAAAACAACAATGTTGGCCAATTCTTAAGTGGTGAAAATAAAGGTTCTCTCAGCTGGATGCAACGTTATGGAATAATTTTAGGCACCGCAAGAGGTTTGGCATATCTGCATGAGGAATTTCATGTTTGTATCATACATAGAGATGTAAAAACTAGCAACATCCTCCTGGATGATGATTTCCAACCTAAAATTGCTGATTTTGGATTGGCAAAGCTTTTGCCAAAAGACCAATCTCATATCAATACACAATTTGCTGGAACAACGGGATACGTAGCACCTGAATATGCAATGCATGGACAATTATCAGAGAAAGTTGACACTTATAGCTATGGCGTAGTTGTCCTAGAAATCATAAGTGGACAAAAGAGTAATAATGCATTGAAGGCCGATGATAAAGGCGGATACCTTCTTCAAAAAGCATGGAAACTGTATGAGAGAGGAATGCATAGAGAGTTTGTTGATGAAACCTTGGACCCAAATGAGTATGATGCAGAAGAAGTAAAGAAAATCATAGAGATTGGTTTGCTTTGCACACAAGCATCTCCTTCAGCAAGGCCAAGAATGTCTGAAATTGTGAGAATGCTCAAAAGAAAGAGCTTAATGGAACACAAACAGCCCACTATGCCTGTCTATGTTGATCCAAGTTCTTGGCCAAAAAGAGAAGACGCCTCTATGACTGACATTTCATCTTCATCAAATGCCACGGTCTCCGTTTCCATTCTATCAGGAAGGTGA 1968 0.4167 MVLRHLQQKPIFFILLSFTIWSWGTLDGVVSEPQTVLVTVGCSLDNVSDASIFQSNLNATFRSMRTKISNQSTHFATEQVVRGNNPTYGLFQCRNYLSIADCLTCFDVADNEIRHNCSAASNGAHIIYDGCFLRYESSSFFEQSTDPVNNIHCGNQTRNSTELASTVQQVLRNMELATPRIAGYFAATKTTVPNSNGSNIYAFAQCVETLTQSGCDNCLNIAIRNFQICLPNSDAKAFDFGCFMRYSTTAFFADNQTIDINHFLNPGDSSKKKAIIGGVVGGASFILILLALIALYMRSQSSKMVPKGDILGATELKGPVIFRYKDLKSATKNFSEKNKIGEEGFGDVYKGTLKNGKVVAIKKLDLGQSKQMEKDFESEVKLISNVHHRNIIRLLGCCSKGQERFLVYEYMKNNNVGQFLSGENKGSLSWMQRYGIILGTARGLAYLHEEFHVCIIHRDVKTSNILLDDDFQPKIADFGLAKLLPKDQSHINTQFAGTTGYVAPEYAMHGQLSEKVDTYSYGVVVLEIISGQKSNNALKADDKGGYLLQKAWKLYERGMHREFVDETLDPNEYDAEEVKKIIEIGLLCTQASPSARPRMSEIVRMLKRKSLMEHKQPTMPVYVDPSSWPKREDASMTDISSSSNATVSVSILSGR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1212 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 89 636 - -
Alju07g1212 655 FunFam Cysteine-rich receptor-like protein kinase 2 148 251 - -
Alju07g1212 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Alju07g1212 655 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Alju07g1212 655 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Alju07g1212 655 FunFam Cysteine-rich receptor-like protein kinase 2 300 410 - -
Alju07g1212 655 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Alju07g1212 655 ProSiteProfiles Protein kinase domain profile. 334 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1212 655 CDD STKc_IRAK 340 608 - -
Alju07g1212 655 Pfam Protein kinase domain 334 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1212 655 ProSiteProfiles Gnk2-homologous domain profile. 145 251 IPR002902 -
Alju07g1212 655 SUPERFAMILY Protein kinase-like (PK-like) 316 606 IPR011009 -
Alju07g1212 655 FunFam Cysteine-rich receptor-like protein kinase 2 411 614 - -
Alju07g1212 655 Gene3D - 147 251 IPR038408 -
Alju07g1212 655 Gene3D - 34 140 IPR038408 -
Alju07g1212 655 Gene3D Phosphorylase Kinase; domain 1 299 410 - -
Alju07g1212 655 SMART serkin_6 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1212 655 Gene3D Transferase(Phosphotransferase) domain 1 411 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1212 Alju-ChrAlju07 36133451 36138222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1212 6 655 Receptor kinase-like Gene Family AT1G70520 35.778 8.33e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1212 Pkinase 1.2e-49 CL0016