Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1211 ATGCAGCCACAACTGCAACAAAAGCCTCTCTTCTTCCTCTTCTTGAACTTCATAGTCTGGTCATGGTGGACACTTGACGGCGTCGTTTCAGATCCTCAGACCAATCTGGTGCGGCTATGGTGTGACCAGGACGGTGACAACGATGGATCGATCATGAAGGAGATCCTAAACGAAACGTTTGGAGACCTGAGAGCTCAGATCAAAGACCAAAACAAACAATTCGCCACAGCTCAAGCAGTGAGGGCTAACATGCCTGTTTTTGGCCTTTTTCAGTGCAGAAACTATCTCTCCGTTGCCGACTGCCTCGCTTGCTTCGACGTCGCCGCCGTAAACATCCGCAACTGCTCCGACCGGGCATACGGTTCCCGTCTCGTCTACGATGGCTGCTTCCTCAGGTACGAGAGCAGTCAACAATATGATGTGGCCAGCGAAAGTTGGGGCAACATAAGATGTGGGAATCAGACAATAAGAGATTCCTCAACGCTTGCTTCAACTGTCCAACAAGCGTTAACAAATCTAAACACAGCAACACCAAAAATGGCTGGATTTTATGCTGCCACTAAAACGCCTGTGCCTAATAGTAATAATGGTTTGAACATTTATGCTATTGCTCAATGTGTTGGAACTCTCTCACAAAGTGGGTGTCAGAATTGCATCAGCTCTGCGTCAGCAAGATTTCAGACTTGTCTTACAAACTCAAATGCTGAGAGTTACGATACGGGCTGCTTCATGAGATACTCCACCACTTCCTTTTTTGCTGATAATCAAACCACTGATTATTTCCCCTTCTTGAAACAGCAAGGTTCATCAAGCAACAATAATAAGGGGGTCATCATTGGTATTGTTATTGGATGTGTAGTGTTTGTTTTGATCCTCCTTATTGCACTATTTATCTGGATTAGACCGCGAAAAAGCCAAAAGAGGGTTCCTAGAGGAGACATGACTGGAATAAGCACGTTGAAAGCCCCAGTTAATTACAATTATAGGGATTTAAAGTCTGCAACAAAAAATTTCAGTTCTGAAAATAAACTTGGAGAAGGAGGATTTGGTTCAGTTTATAAGGGCACTCTGAAGAATGGGAAAGTAGTTGCAGTGAAGAAATTAACTATACGACAATCGAAGAGGATGGAGGAAGAATTTGAGAGTGAAGTGAGGCTTATAAGTAATGTTCATCATCGAAATCTTGTTCGACTTCTTGGATGTTGCAGTAAAGGCAAGACGAGGATTCTAGTCTACGAATACATGGAAAAGACCAGTCTTGACAGATTTTTATTTGGAAAAAAGAAAGGTTCTCTTAATTGGAAGCAACGACATGATATAATTTTAGGAACAGCTAGAGGCTTGACTTATCTACATGAGGAATTTCATGTACGTATCATACATAGAGATATCAAGACTAACAACATCTTATTAGATGATGATCTGCAACCTAAAATTGCTGATTTTGGTTTAGCGAGGCTTTTACCTGAGGACAAGTCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATACAGCACCTGAGTATGCAATTCATGGCCAACTATCAGAAAAAGTTGATGTCTATAGTTACGGTGTCGTAGTCCTAGAAATCATTAGCGGCCGAAGAAACAATGAATTAAGCATCGCTGGTATTGCTGAAGGCGAGTTCCTCCTTCAAAAAGCTTGGAAACTATATCAAAGAGGCATGCACTTAAACTTGGTGGATGATACATTAGACCCTAATGAATATGATCAAGAAGAAGTGAAGAAAATCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCAGAAATAAGGCCAACAATGTCTCAAGTAGTTGGTTTGCTCCAACAGGAAGGTTTAGCAGATGATATAAGACCAACTATGCCTCTTTTGATTGAAATTGATTAG 1896 0.4151 MQPQLQQKPLFFLFLNFIVWSWWTLDGVVSDPQTNLVRLWCDQDGDNDGSIMKEILNETFGDLRAQIKDQNKQFATAQAVRANMPVFGLFQCRNYLSVADCLACFDVAAVNIRNCSDRAYGSRLVYDGCFLRYESSQQYDVASESWGNIRCGNQTIRDSSTLASTVQQALTNLNTATPKMAGFYAATKTPVPNSNNGLNIYAIAQCVGTLSQSGCQNCISSASARFQTCLTNSNAESYDTGCFMRYSTTSFFADNQTTDYFPFLKQQGSSSNNNKGVIIGIVIGCVVFVLILLIALFIWIRPRKSQKRVPRGDMTGISTLKAPVNYNYRDLKSATKNFSSENKLGEGGFGSVYKGTLKNGKVVAVKKLTIRQSKRMEEEFESEVRLISNVHHRNLVRLLGCCSKGKTRILVYEYMEKTSLDRFLFGKKKGSLNWKQRHDIILGTARGLTYLHEEFHVRIIHRDIKTNNILLDDDLQPKIADFGLARLLPEDKSHLSTRFAGTLGYTAPEYAIHGQLSEKVDVYSYGVVVLEIISGRRNNELSIAGIAEGEFLLQKAWKLYQRGMHLNLVDDTLDPNEYDQEEVKKIIEIGLLCTQASAEIRPTMSQVVGLLQQEGLADDIRPTMPLLIEID 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1211 631 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Alju07g1211 631 CDD STKc_IRAK 344 613 - -
Alju07g1211 631 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Alju07g1211 631 SUPERFAMILY Protein kinase-like (PK-like) 319 611 IPR011009 -
Alju07g1211 631 SMART serkin_6 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1211 631 FunFam Cysteine-rich receptor-like protein kinase 2 415 619 - -
Alju07g1211 631 ProSiteProfiles Protein kinase domain profile. 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1211 631 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 624 - -
Alju07g1211 631 FunFam Cysteine-rich receptor-like protein kinase 2 303 414 - -
Alju07g1211 631 Gene3D Transferase(Phosphotransferase) domain 1 415 620 - -
Alju07g1211 631 Coils Coil 53 73 - -
Alju07g1211 631 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Alju07g1211 631 CDD TM_EGFR-like 278 308 - -
Alju07g1211 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Alju07g1211 631 Gene3D Phosphorylase Kinase; domain 1 303 414 - -
Alju07g1211 631 Gene3D - 145 251 IPR038408 -
Alju07g1211 631 Gene3D - 33 137 IPR038408 -
Alju07g1211 631 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Alju07g1211 631 Pfam Salt stress response/antifungal 51 135 IPR002902 -
Alju07g1211 631 Pfam Protein kinase domain 339 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1211 Alju-ChrAlju07 36127963 36131959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1211 9 614 Receptor kinase-like Gene Family AT1G70520 37.236 1.15e-121 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1211 Pkinase 4e-51 CL0016