Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1209 ATGCTTCAACGTCGTCCTCATTTCTTTCCTTTGTTAATTACCTTCATAGTCTGGTCATGCTGCAGCATCCTCAACGGCGTCGTTTCAGAGCCACAGACCAATCTTCTGAAGAGCGAGTGCAATCCAACCTTCGTGTACCTCGTGTCCAGCGTCTCCATCTTCGACGAAAACCTAAAGGCAACGTTGAGACACATCAGAGAGAAGATCAGTGAACAAAAGAAGCACTTTGCCACCGCACAGCAAGGTAATGGAGGAAACCCCGTCTCCACTCTATTCCAATGCAGAAACTACCTCTCCGTGGCCGACTGTCTTGCGTGCTTTGACGTTGCCGCCGCGCGAATCCTCAGCTGCACCGCGGGCTCCTCCGGTGCTCATGTTGTCTACGACGGCTGCTTCCTCAGGTACGACATTAGCAGTTCTTTCCTTGAAGAGACAACACAAACTTTCAACACCGCATATTGTGGTAATAAAACTGAAGGTGGAGACACAACAACATTCACATCTGTTGCACAACAAGTGTTGATGAATCTTCAAACAACAACACCTAGGATCAAAGGTTCTTTTGCTGCAGCCATGAAGATGACAGTGTCAAATAACAATAATACTAATAATGGTCCAACTATTATTTATGCCTTTGCCCAATGTATTGAAACTATTGCACAAAATGATTGTCTCAGTTGCTTGAATGCTGGATACAACAATATGCAGACATGTCTTTCCTATTCTGATAATGGTAGGGCTTTTGCCAATGGCTGCTTCATGAGATACGCCACCACTTCCTTCTTTCCTGATAATTATCAGACCATTGATATTATACCCACCTTCAAAAAAGGTTCAAGTAATAAAGGCGTCATTATTGCTGGAGTTGTTTCTGGTGTAGCTCTTGCTTTGATCCTCGTTGCATTATTTGCTTTTATTAGACGACCTAAAAACCTTGAGGGGGTTCCTAGAGGAGACATACCTGAAGCAAGCAAGTTGAAAGGCCCAGTTGCTTATAGTTATAAGGATTTGAAGTCTGCTACCAATAATTTTAGTGAAGAAAATAAAATAGGAGAAGGTGGATTTGGTGTTGTATACAAGGGAATTTTGAAGAATGGGAAAGTAGTTGCTGTTAAGAAATTAGCTTTACGCCATTCCAATCGGATCGATGAAGAATTTGGGAGTGAAGTGAAGCTGATAAGTAATGTTCATCACCGGAATCTCGTTCGACTTTTGGGATGTTGTAATGCGGGCCACCACAGAATCCTTGTGTATGAATATATGAAAAACAACAGCCTTGATAGATTCTTATTTGGAGGTGAAAAGAAAGGTTTTCTCAATTGGAAGCAGAGATATGAAGTGATCTTAGGAACAGCAAGAGGCTTGATTTATCTTCATGAGGAATTTCATGTCCGCATCATTCATAGAGATATAAAAACAAATAATATCCTTTTAGATGATGATCTACAACCAAGAATTGCTGATTTTGGATTGGCAAGACTTATACCTGAGAACAAAACTCATCTTAGTACAAAATTTGCAGGAACATTAGGATACACAGCACCGGAATATGCAATCCATGGCCAACTATCAGAAAAGGCTGATATTTATAGCTATGGTGTCGTAGTTTTAGAAATCATTAGTGGTCAAAGGTGCAATGAATTGAAGGTCCATGGTGATTTTGAAGGCGAATTCCTTCTCCAAAAAGTGAGAAAATTCCCATCATTATTTGAAAAGACTTTTCTTTATCTTGAGTTGGTGGACAAAGCCTTAGACCCTAATGAGTATGATGCAGAAGAAGTGAAGAAAGTCATAGAGATTGGTTTGCTTTGCACCCAAGCATCTGCGGAAATAAGGCCGGCAATGTCTGAAATAATGGTTTTGCTCCAGAAGAAGGATTTATTAGAGAATCTGAGGCCAACTATGCCTTTCTTCATTGAAACTAATTAG 1929 0.4069 MLQRRPHFFPLLITFIVWSCCSILNGVVSEPQTNLLKSECNPTFVYLVSSVSIFDENLKATLRHIREKISEQKKHFATAQQGNGGNPVSTLFQCRNYLSVADCLACFDVAAARILSCTAGSSGAHVVYDGCFLRYDISSSFLEETTQTFNTAYCGNKTEGGDTTTFTSVAQQVLMNLQTTTPRIKGSFAAAMKMTVSNNNNTNNGPTIIYAFAQCIETIAQNDCLSCLNAGYNNMQTCLSYSDNGRAFANGCFMRYATTSFFPDNYQTIDIIPTFKKGSSNKGVIIAGVVSGVALALILVALFAFIRRPKNLEGVPRGDIPEASKLKGPVAYSYKDLKSATNNFSEENKIGEGGFGVVYKGILKNGKVVAVKKLALRHSNRIDEEFGSEVKLISNVHHRNLVRLLGCCNAGHHRILVYEYMKNNSLDRFLFGGEKKGFLNWKQRYEVILGTARGLIYLHEEFHVRIIHRDIKTNNILLDDDLQPRIADFGLARLIPENKTHLSTKFAGTLGYTAPEYAIHGQLSEKADIYSYGVVVLEIISGQRCNELKVHGDFEGEFLLQKVRKFPSLFEKTFLYLELVDKALDPNEYDAEEVKKVIEIGLLCTQASAEIRPAMSEIMVLLQKKDLLENLRPTMPFFIETN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1209 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Alju07g1209 642 CDD STKc_IRAK 350 624 - -
Alju07g1209 642 ProSiteProfiles Gnk2-homologous domain profile. 148 261 IPR002902 -
Alju07g1209 642 Pfam Salt stress response/antifungal 154 258 IPR002902 -
Alju07g1209 642 Pfam Salt stress response/antifungal 50 136 IPR002902 -
Alju07g1209 642 Gene3D Transferase(Phosphotransferase) domain 1 421 632 - -
Alju07g1209 642 FunFam Cysteine-rich receptor-like protein kinase 2 314 420 - -
Alju07g1209 642 SUPERFAMILY Protein kinase-like (PK-like) 328 630 IPR011009 -
Alju07g1209 642 Pfam Protein kinase domain 345 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1209 642 ProSiteProfiles Protein kinase domain profile. 344 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1209 642 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 640 - -
Alju07g1209 642 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Alju07g1209 642 FunFam Cysteine-rich receptor-like protein kinase 2 421 630 - -
Alju07g1209 642 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Alju07g1209 642 SMART serkin_6 344 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1209 642 Gene3D Phosphorylase Kinase; domain 1 319 420 - -
Alju07g1209 642 Gene3D - 146 261 IPR038408 -
Alju07g1209 642 Gene3D - 32 139 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1209 Alju-ChrAlju07 36077959 36082815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1209 2 640 Receptor kinase-like Gene Family AT1G70520 35.474 5.79e-118 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1209 Pkinase 5.3e-49 CL0016