Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1208 ATGCCTGAACCTCGTAATCTTCTTGTTCCCTTATTTATCTTCATATTCTTCTCATTCCGGATCCTCAACGGCGTCGTTTCGGAGCCACAGGCCAATCTTCTTAAGAGCAAGTGTGACCCACATTTAATCTCCTACGTATTCCCAGACTCCAACGTCTCCGTCTTCAATCAAAACCTAAACGCAACGTTGCGAGACGTCAAAGAGCAGATCAGTACTGTCCAGAACAAGCACTTCGCCACCGCACATGAAGACAATAGAGGAAACCCTGCTTCCACGCTTTTTCAATGCAGAAACTACCTATCTGTCGCTGACTGTGTCGCCTGCTTCGATGCCGCCACTGAGCAAATTCAACTATGCGCCACCGGGACCTCCGATGCCTATGTTGTCTACGACGGTTGCTTCCTCAGGTTCGATATTAGCAATAGTTTCTTCTTTGACGAGGCGACAGAAATTTTGAACGTCACATCGTGTGGGAATCAGACTACTGAAGGAAAGGCCATTACATTTACCTCAGAGGCACAAAAAGTGTTAATGAATCTCCAAAGAGCAACACCCACAATCTCTGGCTTCTCTTTAGCTACTAAAACTCAAGTGCCTAATAATGGTCCCACTATTTATGCTTTTGCTCAATGTATTGAAACTATCACACAAAGCAAGTGCGAGGATTGCTTGAATTCTCAGTACAACAATATGCAGATTTGTCTTTCCAGTTCAGACGGTAGGGCTTTTACTAATGCCTGTTTCTTGAGATATTCCACCACTTCCTTCTTTCCTGATAATCAAACCATTGATATCAGCACACCCTTGAAAAAACAAGATGACAAATCTCATCTCCGTACAAAATTTGCTGGAACATTAGGATACACATCACCAGAGTATGCAATTCATGGCAAATTATCAGAAAAAGTTGATATCTATAGCTATGGTGTTGTAGTGTTAGAAATCATCAGTGGTCAAAGATGCAATAAATTAACGGTTGATGGTGGTAATGAAGGCGAATACCTCCTCCAAAAAGCCTGGAAACTATACGAGAGAGGCATGCACTTAGAGTTGGTGGACAATGCCTTGGACCCTAATGATTATGATGCAGATGAAGTTAAGAAAGTCATAGAGATTGCTTTGCTTTGCACCCAACCATCTGCAGAAACAAGACCAACGATGTCTGAAATAATGGTTTTGCTCCAAAAGAAGGGTTTATTAGAGAATTTGAGGCCAACTATGCCTATCTTCATTGATACTACTTAG 1245 0.4217 MPEPRNLLVPLFIFIFFSFRILNGVVSEPQANLLKSKCDPHLISYVFPDSNVSVFNQNLNATLRDVKEQISTVQNKHFATAHEDNRGNPASTLFQCRNYLSVADCVACFDAATEQIQLCATGTSDAYVVYDGCFLRFDISNSFFFDEATEILNVTSCGNQTTEGKAITFTSEAQKVLMNLQRATPTISGFSLATKTQVPNNGPTIYAFAQCIETITQSKCEDCLNSQYNNMQICLSSSDGRAFTNACFLRYSTTSFFPDNQTIDISTPLKKQDDKSHLRTKFAGTLGYTSPEYAIHGKLSEKVDIYSYGVVVLEIISGQRCNKLTVDGGNEGEYLLQKAWKLYERGMHLELVDNALDPNDYDADEVKKVIEIALLCTQPSAETRPTMSEIMVLLQKKGLLENLRPTMPIFIDTT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1208 414 ProSiteProfiles Gnk2-homologous domain profile. 151 256 IPR002902 -
Alju07g1208 414 FunFam Cysteine-rich receptor-like protein kinase 2 152 256 - -
Alju07g1208 414 Gene3D - 150 252 IPR038408 -
Alju07g1208 414 Gene3D - 44 142 IPR038408 -
Alju07g1208 414 Gene3D Transferase(Phosphotransferase) domain 1 253 408 - -
Alju07g1208 414 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Alju07g1208 414 SUPERFAMILY Protein kinase-like (PK-like) 274 395 IPR011009 -
Alju07g1208 414 Pfam Protein tyrosine and serine/threonine kinase 272 392 IPR001245 GO:0004672|GO:0006468
Alju07g1208 414 Pfam Salt stress response/antifungal 51 138 IPR002902 -
Alju07g1208 414 Pfam Salt stress response/antifungal 157 253 IPR002902 -
Alju07g1208 414 Coils Coil 56 76 - -
Alju07g1208 414 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 93 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1208 Alju-ChrAlju07 36055598 36063255 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1208 273 394 Receptor kinase-like Gene Family AT1G56120 45.902 1.29e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1208 PK_Tyr_Ser-Thr 2.1e-07 CL0016