Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1207 ATGCTGCAACCTCGTAATCTTCTTGTTCCCTTATTCATATTCTTCTCACTCGGGATCCTTAACGGCGTCGTTTCAGAGCCACAGACCCATCTTCTCAAGAGTGTGTGTAACGCATACTTGATTTCCAATGTATTCCAAGACTCTAACGTCACCGTCTTCAATCAAAACCTAAACGCAACGTTGCAAGACATCAAAGAGAAGATCAGTACTGTCCAGAATAAGCACTTGGTCACCTCACAGCAAGGCAATGGAGGAAACCCCGTCGCCACGCTTTTTCAATGCAGAAACTACCTCTCTGCCGTGGACTGTGTCGCGTGCCTCGATGCGGCTGCTGAGCTAATCCGGCGATGCCCCGCAGGGACCTCCGGTGCCCATGTTGTCTACGACGGGTGCTTCCTCAGGTTTGATATTAGCAGTAGTTTCTTTGAAGAGACGACGCAAGGTTTCAACATCACATCGTGTGGGAATCAGACGACAGGAGAAGTAAATGCATTTACCACAGAAGCACAACAAGTCTTGATGAATCTCCAAAGAGCAACACCCACAATCTCTGGCTTCTCTGTAGCTACAAAGACTCGAGTGCCTAATAATAATAATAATGGTCCCACTATCTATGCTTTTGCTCAATGCATTGAAACTATCACACAAAGTAACTGCGAGGATTGCTTGAATTCTCAGTACAACAATATGCAGACTTGTCTTTCCAGTTCAGATGGTAGGGCTTCCTCTAATGGTTGTTTCTTGAGATTCTCCACCTCTTCCTTCTTTCCTGATAACCAGACCATCAATATCACACCCTTGAAAACACAAGGTTCAAGCAATAAGGGAATCATTATTGGTGGAGTCGTTGCAGGTGTATCTCTGGCTTTGATCCTCATTGCATTATTTGCCTTCATTATTATTAGGCGACGAAAAAACCCTAAGATGATCGGTGTTCCTAGAGGAGATATACCTGGAGCAAGCAAGCTAAAAGGCCCAGTTACTTTTAGTTACTATGTTTTGAAGACCGCAACCAAGAATTTTAGTAAAGAAAATAAAATAGGAGAAGGTGGATTTGGTGCTGTATACAAGGGCACTTTGTCCAATGGGAAAACAGTTGCAATTAAGAAATTAACTTTAAACTACTTCAACAAGATAGATGAAGAATTTGAAAGCGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTTGTTCGACTCCTGGGATGTTGTAGTCAAGGCCATAACAGAATCCTTGTTTACGAATACATGAAGAACAAGAGTCTTGACATATACTTATACGGTGAAAAGAAAGGATATCTCAATTGGAAGCAACGATATGAAGTCATTTTAGGAATAGCAAGGGGTTTGACTTATCTACATGAAGAATTCCATGTTCGTATTATACATAGAGATATAAAGACTCACAATATTCTCTTGGATGATGATCTACAACCTAGAATTGCTGATTTTGGATTGGCCAAACTTATACCTGAAGATAAAACTCATCTTAGTACAAGATTCGCCGGAACATTAGGATACACACCACCAGAGTACGCAATTTATGGCCAATTATCAGAGAAAGTTGATATTTATAGCTATGGTGTTGTAGTGTTAGAAATCATCTGTGGTGAAAATTGCAATAACTTAAAGGTTGATGGTGACGATGAAGGCGAATACCTCCTCCAAAGAGCTTGGAATCTATATGAGAGAGGCATGCACTTAGAGTTGGTGGACAATGCCTTGGACCCAAATGATTATGATGCAGATGAAGTTAAGAAAGTCATAGAGATTGCTTTGCTTTGCACCCAACCATCTCCAGAAACAAGGCCAACGATGTCTGAAATAATGGTTTTGCTCCAAAAGAAGGGTTTATTAGAGAATGTGAGGCCAACTAAGCCTATCTTCATTGAAACTTCTTAG 1905 0.41 MLQPRNLLVPLFIFFSLGILNGVVSEPQTHLLKSVCNAYLISNVFQDSNVTVFNQNLNATLQDIKEKISTVQNKHLVTSQQGNGGNPVATLFQCRNYLSAVDCVACLDAAAELIRRCPAGTSGAHVVYDGCFLRFDISSSFFEETTQGFNITSCGNQTTGEVNAFTTEAQQVLMNLQRATPTISGFSVATKTRVPNNNNNGPTIYAFAQCIETITQSNCEDCLNSQYNNMQTCLSSSDGRASSNGCFLRFSTSSFFPDNQTINITPLKTQGSSNKGIIIGGVVAGVSLALILIALFAFIIIRRRKNPKMIGVPRGDIPGASKLKGPVTFSYYVLKTATKNFSKENKIGEGGFGAVYKGTLSNGKTVAIKKLTLNYFNKIDEEFESEVKLISNVHHRNLVRLLGCCSQGHNRILVYEYMKNKSLDIYLYGEKKGYLNWKQRYEVILGIARGLTYLHEEFHVRIIHRDIKTHNILLDDDLQPRIADFGLAKLIPEDKTHLSTRFAGTLGYTPPEYAIYGQLSEKVDIYSYGVVVLEIICGENCNNLKVDGDDEGEYLLQRAWNLYERGMHLELVDNALDPNDYDADEVKKVIEIALLCTQPSPETRPTMSEIMVLLQKKGLLENVRPTKPIFIETS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1207 634 CDD STKc_IRAK 347 616 - -
Alju07g1207 634 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Alju07g1207 634 Pfam Protein kinase domain 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1207 634 Gene3D - 31 139 IPR038408 -
Alju07g1207 634 Gene3D - 147 255 IPR038408 -
Alju07g1207 634 FunFam Cysteine-rich receptor-like protein kinase 2 308 417 - -
Alju07g1207 634 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Alju07g1207 634 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 91 632 - -
Alju07g1207 634 CDD TM_EGFR-like 275 306 - -
Alju07g1207 634 Gene3D Transferase(Phosphotransferase) domain 1 418 623 - -
Alju07g1207 634 ProSiteProfiles Protein kinase domain profile. 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1207 634 Gene3D Single helix bin 266 305 - -
Alju07g1207 634 Coils Coil 54 74 - -
Alju07g1207 634 Pfam Salt stress response/antifungal 154 252 IPR002902 -
Alju07g1207 634 Pfam Salt stress response/antifungal 48 136 IPR002902 -
Alju07g1207 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Alju07g1207 634 Gene3D Phosphorylase Kinase; domain 1 318 417 - -
Alju07g1207 634 SMART serkin_6 341 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g1207 634 SUPERFAMILY Protein kinase-like (PK-like) 325 614 IPR011009 -
Alju07g1207 634 FunFam Cysteine-rich receptor-like protein kinase 2 418 622 - -
Alju07g1207 634 FunFam Cysteine-rich receptor-like protein kinase 2 149 255 - -
Alju07g1207 634 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1207 Alju-ChrAlju07 36003764 36010212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1207 7 632 Receptor kinase-like Gene Family AT1G70520 36.321 1.11e-115 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju07g1207 Pkinase 3.8e-50 CL0016