Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1203 ATGATGCTTTCAACATCAGGGTTGGTTCAGCAGGAACATGAAGAAGAGGAGAAGAAGTGTTTGAATTCGGAGCTGTGGCATGCATGTGCTGGACCTCTGGTTTCCCTACCTACTGCGGGTACTCGTGTTGTTTACTTCCCACAGGGTCATAGCGAGCAGGTTGCGGCTTCAACTAACAGGGAAGTTGATGGTCATATGCCTGATTATCCAAGCTTGCTTCCCCAGTTGATTTGCCAACTTCATAATGTCACAATGCACGCAGATGTTGAAACAGATGAAGTGTACGCTCAAATGACTCTGCAGCCGCTGACTCCTCAAGAGCAAAAGGAAACTTTTCTTCCCATGGAATTGGGCATAACAAGTAGGCAGCCCTCAAATTATTTTTGCAAGATATTAACAGCAAGTGACACTAGCACACATGGAGGCTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTCTTCCCTCCTCTGGATTACTCACAGCAACCACCAGCACAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGCCACGTTTTTCGGGGACAGCCAAAACGTCACCTTCTTACAACAGGCTGGAGCGTATTTGTTAATGCCAAGAGACTTGTGGCTGGAGATTCTGTGCTTTTTATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCAACCACAAACTGTGGTGCCTTCATCAGTTCTATCAAGTGACAGTATGCACATTGGATTGCTTGCAGCTGCTGCTCATGCTGCTGCAACTAACAGCTGTTTTACTGTCTTCTATAATCCAAGGGCTTGTCCATCTGAATTCGTTGTTCGCCTTTCAAAATATATCAAAGCTGTGTACCATACACGTGTTTCAGTTGGTTTGCGTTTCAGAATGCTATTTGAGACTGATGAGTCAAGTGTTCGCCGATACATGGGTACAATAACTGGTATAAGTGATCTGGATCCTGTTCACTGGCCAAACTCTCACTGGCGATCAGTAAAGGTTGGTTGGGATGAATCAACAGTAGGAGAGAGACAGCCAAGGGTATCATTGTGGGAAATTGAGCCTTTGACAACATTTCCAATGTATCCATCACTATTCCCCCTCAGATTGAAACGCCCATGCTATCTCAGCCCCTCATCTGTGAATGATGGAAGACATGATGCAACTAATGGGCTAATGTGGCTTAGAGGGGGAGCTGGAGAACATACTTTCAACTCTTTAAACTTTCAAAGTAGTGGTGTGTTGCCATGGATGCAGCAGAGGTTGGATCCAGCTTTGTTGGGAAGTAATTATAATCAGCAGTACCAAGCATTGTTGGCAGCTGGTTTCAAGAACCCAGGAAATGGAGATCTACTGAGGCAACAAATGCTGCATTTTCAACAATCAGGCAGCCTCAGTCCTTTGCAGCTTCACCAGCAGCAAGCAATTCAGCAATCTGTCCCATCCAATATTCTGCAGCCACAAGCGCAGGTGTTTACTGAGAACCTGGCGCAGAACCTTCTTCAGAAATCACACAACATAAATAATCAGGATGACCAAGCACACCAGCAGAATAATACTTATCATGATTCGCTCTTGATTCAAAGTGATCAGTTCCATCAGATGCAACACTCTAATGTGCCTTCATCATCATATTCAAAACCATATTTCTTAGATTCAAGCATGAAGTTCTCTTCATCAGTTTCCCCCTTACAAAATGTGCTTGGTTCACTGTGTCCTGAAGGGAGTGGTAGTGATATTTTAAACCTATCTAGAACCAGTCAGTCCATGGTGACTGAACAGGTGCCCCAACAATCTTGGACTCCGATGTATCCACCTATGCAGGTCAGTGCCTTTGGCAATTTGATCTCACAAGCACAGTATAGTGGAAAAGATTCTGCATCAGCACCTCCAAGTCGTACTTTGGATAACCAAAATCCTACTCTCTTTTGTAATATCAATTCATCTGGCCTTGTGCTCCCAACTACTGTCCCAGGTTGCGCATCTTCATCAATTGATATTGATGCTTCAACTATGCAAATAGGGGATTCTGGATTTCAGGGTCATCCATATGTTTGCATGCAAGATTCATCTGAATTATTGCAGAGTTCTGGGCGGGTTGACTCACAAAATCAAACCCAGACATTTGTCAAGGTTTACAAGTCAGGTTCAGTTGGGCGCTCACTAGACATCTCCCGGTTTGGCAGCTATCATGAACTGAGAGAGGAGTTGGCTCGGATGTTTGGAATTGAGGGGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGACATGCTTCTCCTTGGCGACGACCCGTGGGAATCATTTGTCAGTAATGTTTGGTACATCAAAATACTCTCTCCTGAAGATATCCAGAAAATGGGAGAGCAAGTGGTGGGACTGGAATCCTTCGGTCATAATGCGGGATAG 2439 0.4473 MMLSTSGLVQQEHEEEEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAASTNREVDGHMPDYPSLLPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMELGITSRQPSNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDVEWKFRHVFRGQPKRHLLTTGWSVFVNAKRLVAGDSVLFIWNEKNQLLLGIRRANQPQTVVPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRACPSEFVVRLSKYIKAVYHTRVSVGLRFRMLFETDESSVRRYMGTITGISDLDPVHWPNSHWRSVKVGWDESTVGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPCYLSPSSVNDGRHDATNGLMWLRGGAGEHTFNSLNFQSSGVLPWMQQRLDPALLGSNYNQQYQALLAAGFKNPGNGDLLRQQMLHFQQSGSLSPLQLHQQQAIQQSVPSNILQPQAQVFTENLAQNLLQKSHNINNQDDQAHQQNNTYHDSLLIQSDQFHQMQHSNVPSSSYSKPYFLDSSMKFSSSVSPLQNVLGSLCPEGSGSDILNLSRTSQSMVTEQVPQQSWTPMYPPMQVSAFGNLISQAQYSGKDSASAPPSRTLDNQNPTLFCNINSSGLVLPTTVPGCASSSIDIDASTMQIGDSGFQGHPYVCMQDSSELLQSSGRVDSQNQTQTFVKVYKSGSVGRSLDISRFGSYHELREELARMFGIEGEDPLRSGWQLVFVDRENDMLLLGDDPWESFVSNVWYIKILSPEDIQKMGEQVVGLESFGHNAG 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1203 812 Gene3D - 292 364 - -
Alju07g1203 812 SUPERFAMILY DNA-binding pseudobarrel domain 112 257 IPR015300 -
Alju07g1203 812 FunFam Auxin response factor 126 230 - -
Alju07g1203 812 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju07g1203 812 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Alju07g1203 812 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 798 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju07g1203 812 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Alju07g1203 812 Gene3D - 706 798 - -
Alju07g1203 812 FunFam Auxin response factor 706 798 - -
Alju07g1203 812 SMART B3_2 128 230 IPR003340 GO:0003677
Alju07g1203 812 CDD B3_DNA 127 228 IPR003340 GO:0003677
Alju07g1203 812 Gene3D - 126 229 IPR015300 -
Alju07g1203 812 SUPERFAMILY CAD & PB1 domains 702 783 - -
Alju07g1203 812 ProSiteProfiles PB1 domain profile. 711 793 IPR000270 GO:0005515
Alju07g1203 812 FunFam Auxin response factor 292 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1203 Alju-ChrAlju07 35947763 35961186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1203 98 803 B3 DNA Binding Superfamily AT5G37020 63.611 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Alju07g1203 B3 1.6e-20 CL0405