Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1179 ATGGCTCTTTGCGCTGCCAAACACCTCTTTCTTCTACCTATATCGCTGGTTGAGCTTGTCATCCGTGTTTCCACCCCCCATCATATCATGATGGCCGACGACATTCCTCAGCTGCCAACTCAAGATCTCTCCGAGCCAGTCATTGACGTCAAACTCTTCAACCGATGGACCTTTGACGATGTTCAGGTAAACGACATATCCTTGGCCGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACTGCTGGGAGGTATTCAGTCAAGCGTTTCAGGAAGGCACAGTGTCCAATTGTTGAGAGGCTTACCAACTCTCTGATGATGCATGGAAGAAATAATGGGAAAAAACTAATGGCAGTGAGGATTATTAAGCACGCGATGGAAATTATCCACTTGCTCACTGATCAAAATCCCATTCAAGTTATTGTTGATGCTGTGATCAACAGTGGACCAAGAGAAGATGCTACACGTATTGGATCTGCTGGTGTAGTCAGACGTCAAGCCGTGGATATTTCTCCTCTGCGACGTGTGAATCAGGCAATTTACCTCCTCACCACAGGAGCCCGTGAATCTGCATTCAGGAACATTAAGACGATTGCAGAATGCTTGGCTGATGAACTTATCAATGCTGCTAAGGGATCTTCAAACAGCTATGCCATCAAGAAGAAGGATGAGATCGAGCGAGTTGCCAAGGCCAACCGTTAA 717 0.4686 MALCAAKHLFLLPISLVELVIRVSTPHHIMMADDIPQLPTQDLSEPVIDVKLFNRWTFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1179 238 Gene3D Ribosomal protein S7 domain 33 238 IPR036823 -
Alju07g1179 238 FunFam 40S ribosomal protein S5 35 238 - -
Alju07g1179 238 ProSitePatterns Ribosomal protein S7 signature. 104 130 IPR020606 GO:0003723|GO:0003735|GO:0006412
Alju07g1179 238 Pfam Ribosomal protein S7p/S5e 92 238 IPR023798 -
Alju07g1179 238 NCBIfam 30S ribosomal protein S7 50 238 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju07g1179 238 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 13 238 IPR000235 GO:0006412
Alju07g1179 238 CDD uS7_Eukaryote 51 238 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju07g1179 238 PANTHER RIBOSOMAL PROTEIN S7 39 238 IPR000235 GO:0006412
Alju07g1179 238 SUPERFAMILY Ribosomal protein S7 51 238 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1179 Alju-ChrAlju07 35450163 35452425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1179 49 238 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.579 1.12e-132 370