Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1150 ATGGTATCAGGTATACTGGCTTACAAATTTGGAGCTCCTTTTGCATGGATCACATCCTTATCAGTTGCTGCCTATGTTATTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGATCATGAATAAAGCTGATAATGATGCAAGTACCAGGGCAGTTGATTCACTCATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGGTGAAAAATATGATGAGTACCTAAAGAGGTATGAAGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTTGGTCAAAATGTTATATTTAGCACTGCACTTTCTACAGCAATGGTGTTGTCTTCTCATGGGATTATGAGTGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTCCTCTTCCAACTTTCTCTTCCGCTTAATTTCCTTGGCAGTGTATATCGTGAGACTATACAGAGTTTAGTTGACATGAAGTCAATGTTTCAGTTGCTTGAGGAAAGAGCTGATGTTAGGGACAAAGACAATGCAAAGCCGCTGGAATTAAATGGAGGGAGCATAGAGTTTGAAAATGTACACTTCAGTTACCTTGCTGAGAGGAAAATACTTGATGGCATATCTCTTGTTGTACCAGCTGGAAAAAGCGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTCATTCTGGAAGTATAAAGATAGATGGTCAAAATATTCAGGATGTAACCCTTCATAGTCTTCGGAAGTCTATTGGTGTTGTTCCACAAGACACTGTACTTTTCAATGATACAATATTTCACAACATCCATTATGGTCGACTTTCAGCCACTAAAGAGGAAGTCTATAAAGCTGCTCAACAAGCAGCAATTGATGACACTATCATGAATTTTCCTGAAAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGCGGTGGTGAGAAGCAACGTGTTGCCTTGGCTCGTGCATTTTTGAAAGCACCTCCAATTCTGTTGTGTGATGAAGCTACGAGTGCACTTGACAGCACAACAGAAGCAGAGATATTAAATGCTTTGAAATCTTTAGCAAATAATCGCACTTCCATATTCATTGCTCACCGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAGTGGAAAGGTTGTTGAACAAGGACCACATGAACTGCTCTTATCTAAGGCAGGAAGATATGCACAACTTTGGGCCCAGCAAAATAACGCAGTTGATGCAGCCATGAAAGTTGGGGCATAA 1317 0.4024 MVSGILAYKFGAPFAWITSLSVAAYVIFTLTVTQWRTKFRKIMNKADNDASTRAVDSLINYETVKYFNNEDYEGEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADVRDKDNAKPLELNGGSIEFENVHFSYLAERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDGQNIQDVTLHSLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYKAAQQAAIDDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLESGKVVEQGPHELLLSKAGRYAQLWAQQNNAVDAAMKVGA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1150 438 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 157 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju07g1150 438 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 5 422 IPR039421 -
Alju07g1150 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 426 IPR027417 -
Alju07g1150 438 Pfam ABC transporter transmembrane region 5 144 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju07g1150 438 FunFam ABC transporter B family member 25 183 436 - -
Alju07g1150 438 SMART AAA_5 216 401 IPR003593 GO:0016887
Alju07g1150 438 Pfam ABC transporter 207 356 IPR003439 GO:0005524
Alju07g1150 438 SUPERFAMILY ABC transporter transmembrane region 4 171 IPR036640 GO:0005524|GO:0016020
Alju07g1150 438 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 191 425 IPR003439 GO:0005524
Alju07g1150 438 CDD ABC_6TM_ATM1_ABCB7 1 165 - -
Alju07g1150 438 Gene3D ABC transporter type 1, transmembrane domain 1 181 IPR036640 GO:0005524|GO:0016020
Alju07g1150 438 ProSitePatterns ABC transporters family signature. 328 342 IPR017871 GO:0005524|GO:0016887
Alju07g1150 438 CDD ABCC_ATM1_transporter 191 426 - -
Alju07g1150 438 Gene3D - 182 436 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1150 Alju-ChrAlju07 34966256 34977474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1150 27 434 Calmodulin-binding Proteins AT2G36910 35.800 9.32e-67 229