Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1131 ATGGCAAAGGGTTGCGCCACCAACACATATGAAGAGGCTCGGAAGCAACGGCTTGAAGAAAACAGAAAAAGATTTGAGGATATGGGGATTTTAAAGATTTCAAAAAATTTATCTGCAATTGTCACACCAGAGAAGAAGGCTACTCCGCTACGTCGACCAAAACAAAAATCAAATAGTAATGATGTCGTGGAACCGAGACGCTCTTCTCGTGTGCGAAATTCTGTTCCTTCATATCGTGAGGAGGTGTTCATGGACCTTCCATCTTTGCGGAAGAGGTCAAGGTCGTCTTCATCATCATGGGGAAGTTATATTGCAAGGCCACTAGATGAAATCAAAGAAGCCACAGATGAAGAAAGAAATCGTGCTTTCATGGCTGCAGAAAAAATTCTGAGCAACTTACAGACTTCGAATCCAGCATTTATTAAGTCAATGGTCCGGTCTCATGTTTATAGTTGCTTTTGGTTGGGTCTCCCTACTAGATTTTGCCAAGACCATCTTCCGAAGACTGCGTGCGACATGATTTTAGAGGATGAAAATGGCTCAGAATTTGAGGCTGTTTTCCTTGGCAATAGAACTGGGGTTAGCGGAGGCTGGAGAGGATTTGCATTGGATCATAAGTTGGATGATGGTGATGCACTTATTTTTGAATTAGTTGAACCTACGAGATTTAAGATTTACATTGTCAGAGCCTTTCCAGAATCAGCTGAATATGGGCAGGATATTTTGGATGAACAAGCTGATACTTGTGCAACCAAGAAGCACAAATCACAATCAAACAAGACAAAAACTAAAGGATCTGCAAATTCTCAGGAACATAAAGCAGAAGATAACATTGACAATGAAATCAAGCCACAAGGGCTAAACACAACCAGGAAAACTAGGTTTTCTCAGAGAAAATCTCAGAAAGAATCCAAAGATTGTAAACTGCTTCCTTCTGATGGTTCAATAAAGGAAGAAAATATTGAAGAAGGGAAAAATTGCACTCCTGAGAAAGCGAATTCTCAAGCTAAGAAAACAAAGTCAAAACGTGGTAAACGAAACTGA 1044 0.4023 MAKGCATNTYEEARKQRLEENRKRFEDMGILKISKNLSAIVTPEKKATPLRRPKQKSNSNDVVEPRRSSRVRNSVPSYREEVFMDLPSLRKRSRSSSSSWGSYIARPLDEIKEATDEERNRAFMAAEKILSNLQTSNPAFIKSMVRSHVYSCFWLGLPTRFCQDHLPKTACDMILEDENGSEFEAVFLGNRTGVSGGWRGFALDHKLDDGDALIFELVEPTRFKIYIVRAFPESAEYGQDILDEQADTCATKKHKSQSNKTKTKGSANSQEHKAEDNIDNEIKPQGLNTTRKTRFSQRKSQKESKDCKLLPSDGSIKEENIEEGKNCTPEKANSQAKKTKSKRGKRN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1131 347 Gene3D - 114 231 IPR015300 -
Alju07g1131 347 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 48 230 IPR044837 -
Alju07g1131 347 MobiDBLite consensus disorder prediction 296 326 - -
Alju07g1131 347 MobiDBLite consensus disorder prediction 266 280 - -
Alju07g1131 347 Coils Coil 8 28 - -
Alju07g1131 347 Pfam B3 DNA binding domain 140 228 IPR003340 GO:0003677
Alju07g1131 347 SMART B3_2 140 231 IPR003340 GO:0003677
Alju07g1131 347 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
Alju07g1131 347 MobiDBLite consensus disorder prediction 47 68 - -
Alju07g1131 347 MobiDBLite consensus disorder prediction 249 347 - -
Alju07g1131 347 SUPERFAMILY DNA-binding pseudobarrel domain 133 229 IPR015300 -
Alju07g1131 347 MobiDBLite consensus disorder prediction 42 74 - -
Alju07g1131 347 CDD B3_DNA 138 229 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1131 Alju-ChrAlju07 34650679 34660251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1131 10 230 B3 DNA Binding Superfamily AT5G58280 49.402 5.81e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju07g1131 B3 3.2e-15 CL0405