Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1130 ATGATTTCTTATAGAGAGAGCATTAGCTTGTGGTATGTGGATTTCGTACAACTTTTTGGACCTGCGAGATGTTATCGTCAGATAAAGAACAAGCCATACCCGAAATCTAGATTCTGCCGGGGTGTACCTGACCCGAAGATCAGGATTTATGATGTTGGGATGAAAAAGAAAGGGGTGGATGAGTTCCCTTTCTGTGTTCATCTGGTATCTTGGGAGAAGGAGAATGTTTCAAGTGAAGCTCTTGAGGCTGCTCGTATAGCTTGCAACAAATACATGGCCAAATTTGCAGGGAAAGATTCTTTCCACCTGCGAGTTCGGGTTCATCCTTTCCATGTTCTTCGCATAAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTTCAGACAGGGATGAGAGGTGCTTTTGGGAAGCCACAAGGAACTTGTGCTAGAGTCAACATTGGTCAAGTGCTTCTGTCTGTTCGTTGTAAGGATAGCAACAGCCACCATGCTCAGGAGGCTCTTCGCCGTGCTAAATTCAAGTTCCCGGGTCGCCAGAAGATCATTGTCAGTAGGAAGTGGGGATTTACCAAATTTAGCCGTGCTGACTATCTGAAGTTTAAGTCAGAGAACCGAGTTGTGCCCGATGGAGTCAATGCCAAGGTTCTTGGGTGCCATGGACCTTTGGCTTTGCGACAGCCTGGAAGAGCTTTCTTGCCTGCTAATGCATAA 711 0.4627 MISYRESISLWYVDFVQLFGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDSFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVNIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKSENRVVPDGVNAKVLGCHGPLALRQPGRAFLPANA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1130 236 CDD Ribosomal_L16_L10e 57 182 IPR016180 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 Pfam Ribosomal protein L16p/L10e 28 182 IPR016180 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 ProSitePatterns Ribosomal protein L10e signature. 124 145 IPR018255 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 NCBIfam 50S ribosomal protein L16 21 190 IPR001197 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 SUPERFAMILY Ribosomal protein L16p/L10e 21 189 IPR036920 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 PANTHER 60S RIBOSOMAL PROTEIN L10 21 229 IPR001197 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 Gene3D Ribosomal protein L10e/L16 20 231 IPR036920 GO:0003735|GO:0005840|GO:0006412
Alju07g1130 236 FunFam 60S ribosomal protein L10 19 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1130 Alju-ChrAlju07 34646371 34649410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1130 21 236 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 85.185 1.69e-138 385