Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1125 ATGGCGACGCTATTGAGGAAAATGTGGGAATCGGTATCAAACCGTTCGTGTTCGGGTTCAAATTCCAACTCGGCGGAACGCTTTCGTAGCGCAGTGGATTCGCCTCTGGGTGTATTCGATCAAATTCCCTCCGATATATTGATCCAAATCCTGAAGCTTCTGGGTCCCAAAGAAGCTGCGAAATTGACTCTTGTCTGCAAAGCGTGGAGATCGCTGGCCGCCGATAACCGGCTGTGGATTTATTTCTTTCAGAATTATCAGTTGGAGCCATGGGATACCATTTTTTTCGCCGAGACTAATTTGAGGTCCGGTCATCCTCTTCCAACCTTAGTCGGTCAGATGCCTCAGCTATCTTTCAAGCGTATATTTGGCCTACGAGCACAAGTTCCTGGTGCTGTTATCATCGATGGTGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAGTATGACCGCCCATCAGGGCGATCGGCTACCTTTTTGGAATTCGGTAACCTCGAGTCTCCAATGTACACTAGACTTAGACATTTTTTTGCAACCATTTATAGCAGGATGCAGGTTAAACCATGTACTCGACCAGTTATTGTTTCTATTCCAATATGCCATTATGACGATACTGAATCTGCCAAAGCATCAAGGCGGCAGCTTAAGGAGGCAATATGTGCTGCCCTCTTTGACATGAATGTTCCTGCTATTTGTGCTGTCAACCAGGCCACTTTGTCTCTGTATGCTGCGAAACAAACTTCTGGAATAGCTGTTAATGTTGGTTTTCAGGCCACATCTATTGTTCCAATTCTGAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTTGTGGGGCTGGGAGCAATCAAACTTACAGGATTCCTTAGGGAGCTTATGCAACAGAACAACATGAATTTTGAATCTTTGTACACTGTTCGCACACTAAAAGAGAAACTATGCTATGTTGCTATTGATTATGAAGCTGAACAATCAAAAGATACACAAGCATCGTTTGAAGCAGCAGGAGAAGGATGGTTTACACTATCGAAAGAGCGGTTTCAAACAGGAGAGATCTTGTTCCAGCCTCGTCTTGCTGGATTGCAAACAATGGGTTTGCACCAGGCTGTAGCTCTTTGTATGGACCATTGCCATTCTGCAGAATTAGCAGGGGACCCTGACTGGTTTAAGACTGTTGTTTTATCAGGGGGAACTGCATGTTTACCAGGTCTAGCAGAAAGGTTAGATAAGGAACTCCGTGAGTTATTACCTCCCCAGTTGTCCAGTGGAATCAAAGTCATACCTCCTCCATATGGTGCTGATACTGCATGGTTTGGAGCAAGGACCATTGGCAATTTGAGTACCTTTCCTGGTCCCTGGTGTATAAAGAAGAAGCACTTCCAAAAGTCTCGTCTCAATCTCATATGGTGA 1410 0.4504 MATLLRKMWESVSNRSCSGSNSNSAERFRSAVDSPLGVFDQIPSDILIQILKLLGPKEAAKLTLVCKAWRSLAADNRLWIYFFQNYQLEPWDTIFFAETNLRSGHPLPTLVGQMPQLSFKRIFGLRAQVPGAVIIDGGSGYCKFGWSKYDRPSGRSATFLEFGNLESPMYTRLRHFFATIYSRMQVKPCTRPVIVSIPICHYDDTESAKASRRQLKEAICAALFDMNVPAICAVNQATLSLYAAKQTSGIAVNVGFQATSIVPILNGKVMRKVGVEVVGLGAIKLTGFLRELMQQNNMNFESLYTVRTLKEKLCYVAIDYEAEQSKDTQASFEAAGEGWFTLSKERFQTGEILFQPRLAGLQTMGLHQAVALCMDHCHSAELAGDPDWFKTVVLSGGTACLPGLAERLDKELRELLPPQLSSGIKVIPPPYGADTAWFGARTIGNLSTFPGPWCIKKKHFQKSRLNLIW 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1125 469 SMART fbox_2 42 82 IPR001810 GO:0005515
Alju07g1125 469 Pfam F-box-like 40 79 IPR001810 GO:0005515
Alju07g1125 469 CDD F-box_AtARP8-like 39 82 - -
Alju07g1125 469 PANTHER ACTIN 174 462 IPR004000 -
Alju07g1125 469 SMART actin_3 130 460 IPR004000 -
Alju07g1125 469 Gene3D - 177 461 - -
Alju07g1125 469 CDD NBD_sugar-kinase_HSP70_actin 133 277 - -
Alju07g1125 469 SUPERFAMILY F-box domain 36 95 IPR036047 GO:0005515
Alju07g1125 469 SUPERFAMILY Actin-like ATPase domain 247 459 IPR043129 -
Alju07g1125 469 Pfam Actin 206 458 IPR004000 -
Alju07g1125 469 Gene3D - 33 105 - -
Alju07g1125 469 ProSiteProfiles F-box domain profile. 36 82 IPR001810 GO:0005515
Alju07g1125 469 SUPERFAMILY Actin-like ATPase domain 131 252 IPR043129 -
Alju07g1125 469 Gene3D Actin; Chain A, domain 4 280 363 - -
Alju07g1125 469 Gene3D - 237 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1125 Alju-ChrAlju07 34540309 34546434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1125 179 459 Cytoskeleton Gene Families AT3G12110 31.034 1.35e-38 142