Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju07g1120 | ATGGATCCTGCTCGCTATGGGCTACATCAAGGCTGGGATAATAACAGCGCTCTTGAGGGTTATGGTGCGGCTCATGAGCCAAATTATCGAGTTGGAGGTTCATATGATGAAAGGAGGTTTATGGATGAAAGGTACTCAAGGGATAATATATACCAGAGAGGTGCCTTTCACCGTGATGGTTTGGATAGGGAGGCATATCCTCCATCAGGACCTGCTGTTGGCCATTGGAGTGAATCCAAACGGAGAGGTTATGGTGAGGACTATTTACTGGACAAGGAATCTAGACGTCTTCAGAGGCCTTATTATGATTCATATCAGCAGATTGATGCTTTCAGAGATAGGGAGGTTGACATGTATCCAGAATTTGAAAAATTTCGCGATGGCTATGCCAGCATTGAAAGCTATGATGATCAAGGATATGATAAACCTGGTAGGTTTGGGGGTCATGATCGGGATGAATATGCATGTGATGATTATGGGTATAGGTCTCGTGCATCCCATCATTATAGGGAGGATAGCCATGATAGGGATATTGATCATGTCCGTCATAGTCATGATTCTGATTATGGGAGAGGTAGAAGAGATAGCAATTGGAGGCGACGTGAATCTCGTGACCGGGAACATGATAGAAGATATCCGAGCAGGGAAAGAGATTTGAGTCCACGTAGGAGGCATGAGCGGTCCCGGTCCCGATCCCATTCTCAGTCTTCGTCTCAATCTCGATCTCGATCCCACTCTCATTCTCATTCACGCTCTCGTTCCCAATCTCATGGATATGACGATCGTCCAAGATCAAGGTCCCCACGAGGTCGAAGTCATGGTCGAAGTTATCGAGAAGACAGCTATCCTGATAGTCGGTATGAGAGAAGTGAAAAGCGAAGGGATCGTGAAGAGAAGAGGCGTGATCATTATTCAGTGGCTCCATCTGCTACTGTTGTTGTTAAAGGTCTTTCACAAAATGCCAACGAAGAAGATCTATACCAGATTCTTGCGGAATGGGGGCCACTTCGGCATGTTCGTGTTATAAAGGAGCGAAATTCTGGCATTTCTCGTGGATTTGCATTTATTGATTTTCCTTCTGTGGGAGCTGCACGGGCAATGATGGACAAACTTGGAGATGATGGTCTTGTCGTGGATGGTAGAAAGCTTTTCTTTGAATATAGTAGTAAGCCAACTGGAGGTCCAGGTGGACCTTTTGGTCAAGAGGGATCTATGAAATCAGGTCATAATCATAAAAGCATTACAGTACCATCTGATTGGATGTGCACCATATGTGGTTACATCAATTTTGCCCGACGAACATCCTGCTATCAGTGTAATGAACCACGAAGTGAGGATGCTCCTGCGGCGGATATTACTTTGTCAAATCCAACAGCCTTGGGAAAGAAAGGATCAGAGGCAGGTCCAACTCATGTATTGGTTGTTCGTGGTTTGGACGAAAATGCTGATGAGGAAATGCTTCGCTATGAGTTCTCCAAACATGCTCCAATTAAGGACCTGCGTCTTGTGAGAGACAAGTTTACTCATGTCTCCAGGGGATTTGCTTTTGTACATTTTTATTCGGTGGAGGATGCCACCAAGGCTCTTGAAGCAACAAATGGAACAACCCTTGAGAAGAACGGACAGATTCTAAGAGTGGCATATGCAAAAAGTATCCTGGGTCCTGGATCAGGAACATCAGGTGCGTCCCAGTCAAGTAGTTTAGCAGCTGCTGCTATTGAGGCCGCGACATTTGCTCAGCAGTATGATTCTGTTGGATGGGCTCCTAAAGAATACAATCCAGATGACAAACAATCTACTGGTCAAGAGCAAACTGGTGCAGCTCAGACAGATGCACTGGCTCCACAAGCGGGCTTTGTTTGGGATGAAGCATCTGGTTATTACTATGATGCTGCTTCAGGGTTTTACTATGATGGGAATACTGGTCTTTACTATGATGGTAATAATGGGATTTGGTATTCTTATGATCACAATACTCAGCAATATATCCCTTGCACTGATCAAACTGAGATTAAAGCGCCTAGTAATCAGTCTGAACCTTCCAAGGTGTCTGGCAGTTCCAGCAGTAAAAAAGTTATTATTTCTGCACCTGCTAGTACTGTTTCATCTGCTGAGAAGCCAGCTTCTTTGGCAGACGCAGTTCAAGCTGCTGCAACTGCTGCCATAGCTGCAGAGAAGAAAGAAAAAGAAAAATTGAAGGAGATAAAGCTTGCTTCCAAGAGCAGTATTCTGGCTAACAAAAAGAAAATGAATAATGTGTTGACAATGTGGAAGCAGAGGAGCCATGAGGGTCAAGCCACTCGTGTAGCTCTGGAAGACAATCACCAATCCACATCCATTGATGATAGGTCTTCTGGATATCCCACAAAGAGCAAGTTCAAGAATGATTTTGCAGATACAAGGGAGAATAATGCGTCCACTTCAGGGATTCCCACTGCCCCTGCTTCTCAGGCTGTTGCTTCTGATTCTCAGGTTCAGCCACGACCTGTTAGTAATAGCCTTGGAGGCACTCTGATGGGGGTTATAAGAGGCTCTGGAAGAGGGATCATTAAATCTGATAGTTCTAACTCAGGACCTACACCTTCAGCTGCTGCATGTGCATCAGGAGCATCTTCATCAACTGTAGATGCTCCGACAGTTGCAACTCCCTTTAGAACAAATGTCTCTGCACTGGGTTCATATGCTACCCCTGCCACTGGTGGAAGTGGCCGAAGAAGGTTTTCAGAAATGCCTCATTCTGCTTCAGCCCCCAAGGAACAACCGCAAACAACCTACAGGGATCGTGCAGCTGAGAGAAGAAGTTTGTATGGTTCATCATTGTCAGTTGGGGATGATTTGGCTGATCTGGAATCTGGGGATCCAAATCGAGATTTTGCATCAAGGAAGGGTGATCCAATGCCTTTCCCTCCTGGGGTTGGTGGAGGACGTGTGGTTGGAGATGCCAACCTTGATACCTATGAGGTGATTACAGCTGACAAAGCAATTGATGAGAACAATGTTGGCAATCGGATGCTCCGCAACATGGGATGGCAAGAAGGCTTGGGCCTAGGTAAGGATGGAAGTGGAATGACAGAGCCTGTCCAGGCACAAGCCGCAGATAGTAGAGCAGGACTTGGAAGCCAGCAGAAAAAGTTGGATCCTAGCCTTGAGGTTCAGGCAGGAGATAGTTACAAGACGCTTATTCACAAGAAAGCACTCGCCAGATTTTGGGAAATGTCGTAG | 3222 | 0.4575 | MDPARYGLHQGWDNNSALEGYGAAHEPNYRVGGSYDERRFMDERYSRDNIYQRGAFHRDGLDREAYPPSGPAVGHWSESKRRGYGEDYLLDKESRRLQRPYYDSYQQIDAFRDREVDMYPEFEKFRDGYASIESYDDQGYDKPGRFGGHDRDEYACDDYGYRSRASHHYREDSHDRDIDHVRHSHDSDYGRGRRDSNWRRRESRDREHDRRYPSRERDLSPRRRHERSRSRSHSQSSSQSRSRSHSHSHSRSRSQSHGYDDRPRSRSPRGRSHGRSYREDSYPDSRYERSEKRRDREEKRRDHYSVAPSATVVVKGLSQNANEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAARAMMDKLGDDGLVVDGRKLFFEYSSKPTGGPGGPFGQEGSMKSGHNHKSITVPSDWMCTICGYINFARRTSCYQCNEPRSEDAPAADITLSNPTALGKKGSEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRVAYAKSILGPGSGTSGASQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDDKQSTGQEQTGAAQTDALAPQAGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHNTQQYIPCTDQTEIKAPSNQSEPSKVSGSSSSKKVIISAPASTVSSAEKPASLADAVQAAATAAIAAEKKEKEKLKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNHQSTSIDDRSSGYPTKSKFKNDFADTRENNASTSGIPTAPASQAVASDSQVQPRPVSNSLGGTLMGVIRGSGRGIIKSDSSNSGPTPSAAACASGASSSTVDAPTVATPFRTNVSALGSYATPATGGSGRRRFSEMPHSASAPKEQPQTTYRDRAAERRSLYGSSLSVGDDLADLESGDPNRDFASRKGDPMPFPPGVGGGRVVGDANLDTYEVITADKAIDENNVGNRMLRNMGWQEGLGLGKDGSGMTEPVQAQAADSRAGLGSQQKKLDPSLEVQAGDSYKTLIHKKALARFWEMS | 1073 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju07g1120 | 1073 | CDD | OCRE_SUA_like | 614 | 665 | IPR035623 | - | |
Alju07g1120 | 1073 | Gene3D | - | 454 | 576 | IPR012677 | - | |
Alju07g1120 | 1073 | SMART | zf_4 | 418 | 442 | IPR001876 | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 800 | 833 | - | - | |
Alju07g1120 | 1073 | CDD | RRM1_RRM2_RBM5_like | 469 | 549 | - | - | |
Alju07g1120 | 1073 | PANTHER | RNA-BINDING PROTEIN | 204 | 1069 | - | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 1016 | 1044 | - | - | |
Alju07g1120 | 1073 | Pfam | G-patch domain | 998 | 1039 | IPR000467 | GO:0003676 | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 253 | 304 | - | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 589 | 609 | - | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 774 | 878 | - | - | |
Alju07g1120 | 1073 | SUPERFAMILY | RNA-binding domain, RBD | 469 | 558 | IPR035979 | GO:0003676 | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 849 | 878 | - | - | |
Alju07g1120 | 1073 | ProSiteProfiles | G-patch domain profile. | 997 | 1043 | IPR000467 | GO:0003676 | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 133 | 304 | - | - | |
Alju07g1120 | 1073 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 416 | 445 | IPR001876 | - | |
Alju07g1120 | 1073 | SMART | rrm1_1 | 311 | 386 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | SMART | rrm1_1 | 472 | 547 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | Gene3D | - | 414 | 446 | - | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 892 | 969 | - | - | |
Alju07g1120 | 1073 | SUPERFAMILY | Ran binding protein zinc finger-like | 410 | 446 | IPR036443 | - | |
Alju07g1120 | 1073 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 471 | 551 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | Gene3D | - | 277 | 413 | IPR012677 | - | |
Alju07g1120 | 1073 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 312 | 372 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 473 | 539 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | SMART | G-patch_5 | 995 | 1041 | IPR000467 | GO:0003676 | |
Alju07g1120 | 1073 | ProSitePatterns | Zinc finger RanBP2-type signature. | 420 | 439 | IPR001876 | - | |
Alju07g1120 | 1073 | Pfam | OCRE domain | 616 | 664 | IPR041591 | - | |
Alju07g1120 | 1073 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 310 | 390 | IPR000504 | GO:0003723 | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 60 | 79 | - | - | |
Alju07g1120 | 1073 | MobiDBLite | consensus disorder prediction | 138 | 225 | - | - | |
Alju07g1120 | 1073 | SUPERFAMILY | RNA-binding domain, RBD | 305 | 407 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju07g1120 | Alju-ChrAlju07 | 34491582 | 34499018 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju07g1120 | 976 | 1042 | C2H2 Transcription Factor Family | AT5G26610 | 43.284 | 3.47e-10 | 60.8 |