Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1096 ATGCTATATATACAGGAGCGCCACACTGCGTCTCCCTCGTATCTATCATTTGAGGACTCTTCTGTGCTTTTCAGGTCTCTGCCAATGGCTGCTAAATCTGTTGTAGACTTGATAGAGTCATCCTCCGGGGTTCATTATTCAGGATTTCACATGGATGCTTTAAATAAAATAAATGCTGGAACTGAGCCTCCAACAACTTCTGTAGCTGATCACATGTATAATCAACCTTTTGTCATAGGTGTTGCTGGTGGGGCTGCAGCTGGGAAAACTGAAGTTTGTAATATGATTATTCAGCAACTTCATGACCAACGAGTTGTAGTTGTTAATCAGGATTCTTTCTATCATAATTTGACGGAGGAGGAACTTACAAGAGTACTAGATTACAACTTTGATCATCCTGATGCTTTTGATACTGAGCAATTGCTTGGAGTTATGGACAAATTGAAGCATGGACAAGCTGTAGATATTCCAAATTATGACTTCAAGAGTTATAAAAGGGATGCATTTCCAGCTAGACGGGTAAACCCTTCTGATGTAATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGACTGGCTAGGAGGATCAAGCGTGATACAGTTCAGAAGAGTCGGGACATTGGTACTGTGCTTGATCAGTATTCTAAATTTGTAAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCCGATATCATTATTCCCCGTGGAGGAGACAATCATGTAGCAATTGATTTAATTGTACAGCATATCCGCACAAAACTTGGTCAGCATGATCTATGTAAAATATATCCCAACCTTTATGTTATCCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAATAAAAACGCATGATTTTGTGTTTTATTCTGACCGTTTGATTCGTCTGGTTGTTGAACATGGCCTGGGACATCTACCATTTACAGAAAAGCAAGTAATCACTCCGACTGGGTCTGTGTACACTGGTGTCGATTTCTGTAAGAGGTTATGTGGAGTCTCCGTCATCAGGAGCGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATTGGCAAAATTCTTATTCATAGAGAAGGGGAAGGAGACAACAGTCAGCAGCTGATATATGAAAAATTGCCTAATGATATCTCAGATAGGCACGTGTTACTGTTGGATCCCATCCTAGGCACAGGAAATTCGGCTGTTCAAGCAATTTCTTTACTTATAAAAAAGGGTGTACCAGAGTCCAACATTATATTTCTCAATCTCATATCGGCACCCCAAGGTGTGCATGTGGTCTGCAAAGCATTTCCCAGAATAAAAATCGTGACATCTGAGATTGAATTGGGCCTGAATAAAGACTTCCGTGTTGTACCGGGCATGGGCGAGTTTGGGGACCGGTATTTTGGCACAGATGATGATCAACAGGTGGTGGTCCCTTCACAGTAG 1527 0.4093 MLYIQERHTASPSYLSFEDSSVLFRSLPMAAKSVVDLIESSSGVHYSGFHMDALNKINAGTEPPTTSVADHMYNQPFVIGVAGGAAAGKTEVCNMIIQQLHDQRVVVVNQDSFYHNLTEEELTRVLDYNFDHPDAFDTEQLLGVMDKLKHGQAVDIPNYDFKSYKRDAFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIKRDTVQKSRDIGTVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQIKTHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGEGDNSQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIKKGVPESNIIFLNLISAPQGVHVVCKAFPRIKIVTSEIELGLNKDFRVVPGMGEFGDRYFGTDDDQQVVVPSQ 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1096 508 FunFam Uridine kinase 280 497 - -
Alju07g1096 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 269 IPR027417 -
Alju07g1096 508 PRINTS Uridine kinase signature 208 218 - -
Alju07g1096 508 PRINTS Uridine kinase signature 106 117 - -
Alju07g1096 508 PRINTS Uridine kinase signature 151 166 - -
Alju07g1096 508 PRINTS Uridine kinase signature 244 257 - -
Alju07g1096 508 PRINTS Uridine kinase signature 222 233 - -
Alju07g1096 508 PRINTS Uridine kinase signature 76 93 - -
Alju07g1096 508 FunFam Uridine kinase 73 279 - -
Alju07g1096 508 Pfam Uracil phosphoribosyltransferase 294 497 - -
Alju07g1096 508 SUPERFAMILY PRTase-like 279 498 IPR029057 -
Alju07g1096 508 CDD PRTases_typeI 353 470 IPR000836 -
Alju07g1096 508 PANTHER URIDINE KINASE 69 407 - -
Alju07g1096 508 CDD UMPK 89 276 IPR000764 -
Alju07g1096 508 Pfam Phosphoribulokinase / Uridine kinase family 78 264 IPR006083 GO:0005524|GO:0016301
Alju07g1096 508 Gene3D - 73 279 IPR027417 -
Alju07g1096 508 Gene3D - 280 497 IPR029057 -
Alju07g1096 508 NCBIfam uridine kinase 75 276 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1096 Alju-ChrAlju07 33951544 33960384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1096 29 500 PRT Gene Family AT4G26510 82.664 0.0 804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1661 08 13625109 13630779 Alju07g1096 07 33951544 33960384 CCT
Alju07g1096 07 33951544 33960384 Alju07g1096 07 33951544 33960384 ECH