Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1072 ATGAATTCTGGGTCCTTAATTTCCTTTGCTTCATCAAATTCTGCAACAAGAGAAGACAGAGTGGCTAGTGCTAGAACCAGGCCTTCTCCTCATAATCCAAGGCCTTCTTTTTTGATTCGGACAGCCATGAGAATATCAAGAGCAAGATGGTTCACCTTCTTAAGAAGAGTTTTCCATTACCAAAATGGGTCAAGGTCTGATCTTGGTTCCAACCCTTTCAATTCCAGCACTTGGATGACTTTAGAGTTTATTGCTTTGATGGTTCAGATAAGCCTCACAACCTTGGTTTTGGCCATTTCTAAGAGGGAGAGACCTGTTTGGCCTATGAGAATTTGGATTTCTGGTTATGATATTGGTTGTCTTCTCAATCTGTTGCTGCTTTATGGGCGATATCGTCAGCTTTACTTGTCTCATGGTGATGCTCTTAGCCTCTCTGATATGGAACAACAGAGAGGCAATGAAGAAGCCAGGTGTTCACATTTAATGAACAAATGCCGGACTTCGCTTGAGCTTTTCTTCGCTATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCACGTTTCGGGTCATTCCAAAGATCGCCGAAGCTGCATATGCTTTGCATCTCCTTGCTTGCTTGGAATGCCATAACCTACTCGTTCCCTTTCCTTCTCTTCCTCCTGCTGTGCTGCTGTGTGCCTCTGATCAGCAGCCTCCTCGGTTACAACATGAACATGGCTTCTTCTGATAAGGGAGCTTCTGATGATCAAATCTCACAGCTCCCAAGTTGGAGATACAAACAAGTTCATAACAACTTAGACAATGGCCATGATTCTGCAGCCAGTGAAGGACTGATCAATGAAGATCCTGAATGTTGCATTTGCTTAACCAAATACAAAGACAGAGAAGAAGTGAGGCAATTGCCATGTTCTCATATGTTTCACCAAAAATGTGTGGATCAATGGCTCATAATCATATCTTGTTGCCCTCTATGTAAACAAGGATTACAGAGATAG 999 0.4264 MNSGSLISFASSNSATREDRVASARTRPSPHNPRPSFLIRTAMRISRARWFTFLRRVFHYQNGSRSDLGSNPFNSSTWMTLEFIALMVQISLTTLVLAISKRERPVWPMRIWISGYDIGCLLNLLLLYGRYRQLYLSHGDALSLSDMEQQRGNEEARCSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRSPKLHMLCISLLAWNAITYSFPFLLFLLLCCCVPLISSLLGYNMNMASSDKGASDDQISQLPSWRYKQVHNNLDNGHDSAASEGLINEDPECCICLTKYKDREEVRQLPCSHMFHQKCVDQWLIIISCCPLCKQGLQR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1072 332 ProSiteProfiles Zinc finger RING-type profile. 286 327 IPR001841 -
Alju07g1072 332 SUPERFAMILY RING/U-box 275 330 - -
Alju07g1072 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 331 IPR013083 -
Alju07g1072 332 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 13 330 - -
Alju07g1072 332 SMART ring_2 286 326 IPR001841 -
Alju07g1072 332 Pfam RING-like zinc finger 285 313 IPR001841 -
Alju07g1072 332 Coils Coil 144 164 - -
Alju07g1072 332 MobiDBLite consensus disorder prediction 1 35 - -
Alju07g1072 332 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1072 Alju-ChrAlju07 33560645 33563384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1072 37 330 C3H Transcription Factor Family AT4G26580 71.959 8.90e-151 425