Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1039 ATGACAGGCCTCTTCATTGCAATCAAGAATAACGTTGATGTTGAATCTGTTCTTAAGAGGTTCCATATAGGTGGAGTCTTCCCCAAAGATGATTATCACAAGCTAACAATTCCTTCGGGAGAAGCTGATGGTTCTTCTGTGTTCCACGAGACACCTGCATTGGCACCGGTGACCCAAGAGAAGTCTAGGAATCGGACGGCTGAGCTCGCGGCCTCCTGGAGTAGGGCTTTCGCCTTGGCTTTGCTCTGTAACAAGGCTCTCTTTCCCATCCGAGTTCCGATCACTATTGCTTTAATGCCTCCTATCGCGAGGTTCTTGGCCAGGAGGAATATCATCAAGACTGACGCAGTGTTCTCTTGTATGGAAGAGATTCATAGGATCAAGGCTAATAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCCAAGAACGTAAGAGAAGCTGAGAAGCTTTTGGTTAAAAAAGCAGAAGCAGAAGCAGAAGTAAGTTTTTGGGTGGAGTTGGTGTAG 516 0.4651 MTGLFIAIKNNVDVESVLKRFHIGGVFPKDDYHKLTIPSGEADGSSVFHETPALAPVTQEKSRNRTAELAASWSRAFALALLCNKALFPIRVPITIALMPPIARFLARRNIIKTDAVFSCMEEIHRIKANNPDISHREAFSTAAKNVREAEKLLVKKAEAEAEVSFWVELV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1039 171 Coils Coil 143 163 - -
Alju07g1039 171 Pfam YABBY protein 122 146 IPR006780 GO:0007275
Alju07g1039 171 Pfam FAM210A/B-like domain 2 100 IPR009688 -
Alju07g1039 171 PANTHER UNCHARACTERIZED 2 113 IPR045866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1039 Alju-ChrAlju07 32235911 32237703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1039 122 146 C2C2-YABBY Transcription Factor Family AT2G26580 96.000 2.74e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju07g1039 DUF1279 3.1e-10 No_clan