Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1028 ATGATATGCCTACACCAAAAGAAAGGTTCAGATTCTTCAGCTCTCATCCAATCTGACGGTTCGAAACGCCTCACTCCCTTCCAAACCTCCAAAACCGCTTCTTCTTCTTCTTCTTCTTCCTTCCCTCTCGTCGGAGAAGCAGCCACTCGCCAGCCGATCATTTTCGACCTTCCCACCGAATATACTTTTCCATCCACCAGATACACAAAATCCAAGTTTAATTCTCTGAAGTGGGATCGGATTACAATTCGTCGAAAATTCCTTCAAGTCAACGCATGTTCTTCCTCCGTCTCATCCCCGCCGACGAATTCAGAGACAGATTTGTGTGCTGAAGCTGAAAAATCACTCTCTGCTGTAGTGCTTAAATTTCACGCTGAGTCGATTGATTCGAGTTTGGTTGAGTCGTCGATGGCGGACTCAGATAACGATTCCGGAGGTGCTCAGAACGCGGCGAATGCGAACAGCAGCGAACAATCACTGCGAGAGCAAGACCGGTTTCTACCAATCGCAAATGTGAGCAGGATCATGAAGAAGGCTCTTCCAGCTAATGCGAAGATCTCGAAGGACGCCAAGGAGACAGTACAAGAGTGCGTATCGGAGTTCATAAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAGAGAGAGAAGCGGAAGACTATCAATGGCGACGATTTGCTGTGGGCGATGACGACGTTAGGATTTGAAGACTACGTGGAGCCGCTCAAGATATATCTCCAGAGATTCAGGGAAATGGAAGGCGATAAGAGCGTGGCGGCGCGTGACAAGGACGGCGGTATTGGAGGCGTGAACGCTGCCAACAGTGGCTTCGAGGGCGGAGGAGGTGGTGGAGTGTATGGTGGTGTGGGGATGATGATACATCAGGGACACGTGTACGGTTCTGGAGGGTTTCATCCAATGGCTGTGAGTGGAGGAAGTGGTGGTCCTGTGATGGGTAAGAGTGGGCCCAGTTATCCCAGTGCCGGATCTAATGCAGGTAGGCCCAGATAG 1011 0.5094 MICLHQKKGSDSSALIQSDGSKRLTPFQTSKTASSSSSSSFPLVGEAATRQPIIFDLPTEYTFPSTRYTKSKFNSLKWDRITIRRKFLQVNACSSSVSSPPTNSETDLCAEAEKSLSAVVLKFHAESIDSSLVESSMADSDNDSGGAQNAANANSSEQSLREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQRFREMEGDKSVAARDKDGGIGGVNAANSGFEGGGGGGVYGGVGMMIHQGHVYGSGGFHPMAVSGGSGGPVMGKSGPSYPSAGSNAGRPR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1028 336 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 140 257 IPR027113 GO:0001228|GO:0006355|GO:0016602
Alju07g1028 336 Gene3D Histone, subunit A 153 271 IPR009072 GO:0046982
Alju07g1028 336 MobiDBLite consensus disorder prediction 134 160 - -
Alju07g1028 336 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 166 230 IPR003958 -
Alju07g1028 336 ProSitePatterns NF-YB/HAP3 subunit signature. 197 213 IPR003956 GO:0005634|GO:0006355|GO:0043565
Alju07g1028 336 PRINTS CCAAT-binding transcription factor subunit A signature 213 231 - -
Alju07g1028 336 PRINTS CCAAT-binding transcription factor subunit A signature 232 250 - -
Alju07g1028 336 PRINTS CCAAT-binding transcription factor subunit A signature 194 212 - -
Alju07g1028 336 FunFam Nuclear transcription factor Y subunit B-3 155 276 - -
Alju07g1028 336 SUPERFAMILY Histone-fold 163 262 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1028 Alju-ChrAlju07 31851240 31852521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1028 137 260 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.677 1.06e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Alju07g1028 CBFD_NFYB_HMF 4.9e-27 CL0012