Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1024 ATGGCTAGTAATGGTGCAAGGGAGCCCTTGTTGCCACAATCACCAGATCCAGCACCTCCAAAAATAAATGGCCAGGTTAGCAGGAGAAGGTATCTCCGTTGTAGAAGTGCTCCTCTTGCTAATGTTGATCCACCTGAGAAAACCAACATTGGCTCAATTCATCGTTCTGACTCCATATTTGGGAAGTTACATCCAAGTTTTCGAAATGTCGCTATATATTTTATAGGTTATTTAGGTATTGGAGCTGTGATCTTCTATCTTGTCAGGCACCAGATCACAGGGAAGAAAACAGAGGGGGTCCTTGATGCTATATACTTTACAATTGTCACGATGACCACAGTTGGATATGGAGACCTTGTGCCAAATAGTGACCTTACAAAACTACTTGCTTGTGCTTTTGTCTTCACAGGAATGGCACTAGTTGGTTTAATCTTAAGCAAAGCAGCAGACTACTTGGTTGAGAAGCAGGAAGTTTTGATAATCAAAGCACTACATAGGAACCATAAAGTTGGTCCAACTCAAATTCTACAGGAGGCTGAGGTCAACGGGACGTGGTATAAATTTTTTGTGGTATTTTTCATGCTTTTGGCGCTCATTATTATGGGGACGATTTTCTTAGTTGCTGTTGAGAAATTGGATGTTATCGATGCATTCTATTGTGTTTGTTGTACAATAACAACCCTGGGTTATGGTGATAAAAGCTTCTCAAGTGAAGGAGGAAGAGTCTTTGCTGTGTTTTGGATATTGACTGGTACTATTTGCTTAGCTCAGCTTTTCCTTTACATTGCTGAGATGAACACTGCAAAAAGACAAAAGGAAATCACTAAGATGGTTCTTACACGGAGGACAACCACTGCAGATTTGGAGGCAGCAGATATTGATCATGATGGAACTGTTGGGGTTGCTGAGTTCATTATCTATAAGCTCAAAGAGATGGGGAAGATAAGTCAAGAAGATATCGCACTCGTAATGCAACAGTTTGAAGAGCTTGATTTTGATCAATCCGGTACTCTTTCACCTTCTGATATAACTCTTGCTCAGGCACCTTCTCCATCTTAG 1059 0.4089 MASNGAREPLLPQSPDPAPPKINGQVSRRRYLRCRSAPLANVDPPEKTNIGSIHRSDSIFGKLHPSFRNVAIYFIGYLGIGAVIFYLVRHQITGKKTEGVLDAIYFTIVTMTTVGYGDLVPNSDLTKLLACAFVFTGMALVGLILSKAADYLVEKQEVLIIKALHRNHKVGPTQILQEAEVNGTWYKFFVVFFMLLALIIMGTIFLVAVEKLDVIDAFYCVCCTITTLGYGDKSFSSEGGRVFAVFWILTGTICLAQLFLYIAEMNTAKRQKEITKMVLTRRTTTADLEAADIDHDGTVGVAEFIIYKLKEMGKISQEDIALVMQQFEELDFDQSGTLSPSDITLAQAPSPS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1024 352 Gene3D - 192 253 - -
Alju07g1024 352 SUPERFAMILY Voltage-gated potassium channels 183 317 - -
Alju07g1024 352 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Alju07g1024 352 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Alju07g1024 352 Gene3D - 254 349 - -
Alju07g1024 352 Gene3D - 64 158 - -
Alju07g1024 352 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Alju07g1024 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju07g1024 352 SUPERFAMILY Voltage-gated potassium channels 64 160 - -
Alju07g1024 352 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju07g1024 352 PRINTS Two pore domain K+ channel signature 226 235 IPR003280 GO:0005267|GO:0016020|GO:0071805
Alju07g1024 352 SUPERFAMILY EF-hand 282 345 IPR011992 -
Alju07g1024 352 Pfam Ion channel 73 153 IPR013099 -
Alju07g1024 352 Pfam Ion channel 194 266 IPR013099 -
Alju07g1024 352 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1024 Alju-ChrAlju07 31723696 31725640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1024 1 350 Ion Channels AT5G55630 54.372 1.22e-136 391