Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1016 ATGGCGCATTCTAGCGAGAGGGAAGAGGGCATTACCTTTCACTTCACTGGGAAAGCTGAGGGAAAGCAGAATCAACGAAGAGCTTCAATGGCTGTTTCTTCCATTTCTTCTTCGTCATTAGTTCCTTCTCTTTCACTCATCTCATCGTCTTCCCTGAATTCTAAAGCAAAATTCTCCTTTTCCTTCTGGAACACTGGTACTAACGCGTTTAAGCTTCAAAGCTCAAATCCTCTGCTATCGTCAACTAGGGTTTATGCTGCTCCCGAAGTGTTGGATTCCCCAGATTCCGCTGAAGTTCCTCCACCAACCCCTGATGACTCCGACTCCACCGCCCTTGAGGTTGGAGACTTGGGGACTCCAAGCACCTCATCTCTTAGCATTGGTGCAGATGCAGATGCGATGGCTCCAAAGCAGAAAATTAGAATCAAACTTAGATCTTATTGGGTTTCCCTGATAGAGGATTCATGCAAGCAGATAATGGATGCAGCAAAAAATACCAATGCAAAAACCATGGGTCCTGTACCATTACCAACTAAGAAACGAATCTACTGTGTTCTTAAATCTCCACATGTGAACAAGGATGCCCGATTCCATTTCGAGATAAGAACCCATCAGCGTCTCATTGATATTCTATATCCTACTGCCCAAACAATAGATTCTTTGATGCAACTTGATCTTCCTGCTGGTGTTGATGTGGAGGTCAAACTCTAA 711 0.443 MAHSSEREEGITFHFTGKAEGKQNQRRASMAVSSISSSSLVPSLSLISSSSLNSKAKFSFSFWNTGTNAFKLQSSNPLLSSTRVYAAPEVLDSPDSAEVPPPTPDDSDSTALEVGDLGTPSTSSLSIGADADAMAPKQKIRIKLRSYWVSLIEDSCKQIMDAAKNTNAKTMGPVPLPTKKRIYCVLKSPHVNKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1016 236 MobiDBLite consensus disorder prediction 1 42 - -
Alju07g1016 236 Pfam Ribosomal protein S10p/S20e 141 235 IPR027486 -
Alju07g1016 236 MobiDBLite consensus disorder prediction 1 15 - -
Alju07g1016 236 SUPERFAMILY Ribosomal protein S10 139 236 IPR036838 -
Alju07g1016 236 MobiDBLite consensus disorder prediction 18 42 - -
Alju07g1016 236 ProSitePatterns Ribosomal protein S10 signature. 163 178 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 PRINTS Ribosomal protein S10 family signature 139 152 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 PRINTS Ribosomal protein S10 family signature 195 209 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 PRINTS Ribosomal protein S10 family signature 174 189 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 MobiDBLite consensus disorder prediction 92 125 - -
Alju07g1016 236 FunFam 30S ribosomal protein S10 134 236 - -
Alju07g1016 236 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 83 236 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 Gene3D Ribosomal protein S10 domain 128 236 IPR036838 -
Alju07g1016 236 Hamap 30S ribosomal protein S10 [rpsJ]. 137 236 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 NCBIfam 30S ribosomal protein S10 138 235 IPR001848 GO:0003735|GO:0005840|GO:0006412
Alju07g1016 236 SMART Ribosomal_S10_2 141 235 IPR027486 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1016 138 236 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 32.000 3.72e-09 51.6