Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0992 ATGAGTTACCAGACGCTCTTCGTTTTCTTTGAGACATATATTGCTGAGTTCTCGTCTCCATTGCCTTTCTTTCAATTTCAGCGGCACCTTCACATTAGGTTTCGATTTTCTGAAATGAATCACTCGGACATTGAAAATATTGATGAAACTAGTATAAATTGGGAACAAGGTCTGAGTCAGTATGAAATGGCGATGTGTTCCGGGACTAAGACAATGCAAATAGAAGCCTTGATGAAGCTAGCCCGTCTCTCTAAACATGCCCCTGAGAGTTTATTAGTTCGCATTATACCCAATCTCGTTGAGAATCTCGATGATTACCGTTCAATTCATTCAAGTTGTTCTCTTCAAAAGGCTTCTGCTTATTGCTTAAAATGTATAGCTTGTAGAGGTGATGGTGGGTTGGCAAAGGAAATAGGTAGACGTGGTGCAGCAAATTCTTTGTTATGGTGGTTGTCACACTCTAATGGGCAGTTTCAAGAAGTCCTGATAAAATGTTTGCTTGTTGTTGTTACTTTTTGTGATTCAAGTCGTGCAGTTGTTGCTAGTATTGGTGGCGTAGAAGTTATAGTCAGTTTGTTAGATCCTTGTACAAATGATATTAGGCTATACCTGTTGGAAATTTTGAGTGCATTGTCATTGCTGAGGGATGTTAGGAGGGCCCTCACTAGATTAGGAAGTCTTAAATTTCTTGTGGAGGCTGCTAGCTGTGGTAGCATGGTTTCTAGGGAAAGAGCTTGTCAAGCAATTGGGTTACTTGGCGTCCCAAGACGGGCCAGGCGTACGCTAGTTGAACTAGGAGTGATTCCAGTACTTGTTGAGTGTCTTCGTGATGGAGATCACGCCATGAAACTTGTGGCTGGTAATGCCCTTGGTGTGATCTCTGCTCATATTGATTATATTAGATTAGTTGCTCAATCTGGGGTTATCTGTCTCTATGCTGAGCTTCTCCAAGGACATGACCCTTCTGGTAAGGAGATTGCTGAGGATGTATTTTGTATATGGGCTGTTGCTGAGGAGAATGCTATTGAAATTACCAGACATTTGGTGAGAATTCTTAGAGAAGGCGACGATGAATCAAAGGCATCTGCTGCTGATGTGTTATGGGATCTGGCAAGTTACAAGCACGCAACATCTATGATCCGGGAATCAGGTGTGATTCCAATTCTGGTTGAGCTTTTGCAGAGTGGAAATGAAGAGATAAAGCAGAATGTTTCCGGAGCGTGTGCTCAACTGAGTTATGATGAGGCAGATAGAATGGCACTTGCTGAAGCGGGGGCAATCCCAATTCTCATCGAAATGATGCTGCATGATGAGTTGGAGGAAGTAAGGGATAATGCAGCCGAGGCTCTTGTCAACTTTGCTGAAGATCCTTTGTACCATGATAGAGTATCTGATGCAATAAGTGCTCCTTCATTTAGAGATATGCAGAGCAGATTACTTCACATTCGTGCTTCAAATGAGCATATGGCTAGATCGTTACGTAGGATGACTGATTGGCAGCTCACATGGAACCCTGATCTTACTTGA 1527 0.4257 MSYQTLFVFFETYIAEFSSPLPFFQFQRHLHIRFRFSEMNHSDIENIDETSINWEQGLSQYEMAMCSGTKTMQIEALMKLARLSKHAPESLLVRIIPNLVENLDDYRSIHSSCSLQKASAYCLKCIACRGDGGLAKEIGRRGAANSLLWWLSHSNGQFQEVLIKCLLVVVTFCDSSRAVVASIGGVEVIVSLLDPCTNDIRLYLLEILSALSLLRDVRRALTRLGSLKFLVEAASCGSMVSRERACQAIGLLGVPRRARRTLVELGVIPVLVECLRDGDHAMKLVAGNALGVISAHIDYIRLVAQSGVICLYAELLQGHDPSGKEIAEDVFCIWAVAEENAIEITRHLVRILREGDDESKASAADVLWDLASYKHATSMIRESGVIPILVELLQSGNEEIKQNVSGACAQLSYDEADRMALAEAGAIPILIEMMLHDELEEVRDNAAEALVNFAEDPLYHDRVSDAISAPSFRDMQSRLLHIRASNEHMARSLRRMTDWQLTWNPDLT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0992 508 Pfam HEAT repeats 346 450 - -
Alju07g0992 508 SUPERFAMILY ARM repeat 347 462 IPR016024 -
Alju07g0992 508 Gene3D - 345 494 IPR011989 -
Alju07g0992 508 SUPERFAMILY ARM repeat 42 372 IPR016024 -
Alju07g0992 508 Coils Coil 436 456 - -
Alju07g0992 508 Gene3D - 55 335 IPR011989 -
Alju07g0992 508 SMART arm_5 255 295 IPR000225 GO:0005515
Alju07g0992 508 SMART arm_5 373 413 IPR000225 GO:0005515
Alju07g0992 508 SMART arm_5 414 455 IPR000225 GO:0005515
Alju07g0992 508 SMART arm_5 329 372 IPR000225 GO:0005515
Alju07g0992 508 SMART arm_5 173 213 IPR000225 GO:0005515
Alju07g0992 508 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 384 426 IPR000225 GO:0005515
Alju07g0992 508 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 4 ARMC4 358 465 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0992 259 457 U-box Gene Family AT2G23140 27.670 1.23e-10 62.0