Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0988 ATGGAGGCTACTAACCTCTCGGTTTCGCAGCTCCAGCCTTCGGATTCCGATGATGTAGCATTTAACGATCTGAATCAGCTCGGGTCGCGGCAGAATTCGGACGCTGGAGCATCTGCCTCTGGAAGTGGAGGTGCCAGATACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCTCCCTGTATTACGATACCTCCCGGGTTGAGTCCGACGTCGTTTCTGGAGTCCCCGGTCCTTCTGTCCAACATGAAGGTGGAGCCCTCGCCAACAACAGGGTCCCTCACTAAGCCTCAAGCAGTGTTTGGTTCTGTTGCTTCTGCAGCATTTCCTGTAACGACTATATTCTCAAATACCAATACTGTTGATGACAGAAAATCTGGCTTCTTTGAGTTTAGACCACTCAGTAGCACAGATATGGTTCCTGCTGATTTTACCAACCATGTGATAAGTGAACAGTTCAGGCAAATAGATGGTCCAGGGCTTGTTCAATCATATGCCTCATCAACATTAGTTAAGACTGAGACAGCAGTGCCATCAAATAATTTGTGTCTATCATCGACTGTTCAAATGGTTAGTTCAGGTGCTAGTGCTCCTACCGAAGTTGATCCGGATAAACTTAACCAGAAAGGCAATGCTTCCCCTGGGCTTCAAGCATCTTTAGTTGATGGTAGAGGAAATGGCCTTCCAGTTGCAGCCGAGAGAATATCAGATGATGGATACAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGATGTGAATTTCCGCGCAGCTACTACAAGTGCACACACCCAAACTGTGAAGTAAAGAAGTTATTTGAACGCTCTCATGATGGGCAAATAACAGAGATAATTTATAAGGGAAAACATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTGCTGGTACTATGATGTCCATACAAGAAGAGAGAACTGACAAGGCTTTGTCAGCCAACCAAGATGACAAATCATCCAATCTGCATGCTCTGGTGCCTCACATTGCTGAACCCAACAGTAACCCAGATCAATCTCCCGTGCCTGCTGATAGTCCAGAGGGTGTTGGGTTAGTGTCAAATAGGGTTAATGATGAGGTTGATGATGATGATGATCCCTTCTCAAAGAGAAGCAAAATGGACACTGGAATTGCTGACATTACCCCTATAGTTAAGCCAATCCGGGAGCCACGGGTTGTTGTACAAACACTAAGTGAGGTTGACATATTGGATGATGGTTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGTCGGTTGCCCTGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATAACCACCTACGAGGGCAAACACAATCATGACGTGCCTACTGCGAGGAGCACTAGCCATGACACAGCAGGACCAACAGTTGCTGCTGGAGGGCAGACAAGAATTCGACCCGAAGAAAGTGATAATATTAGCCTTGACCTTGGGATGGGCATTAGATCAGCTGCTGAAAATATACCAAACAGACAAGGCCAATTTCTGCTCTCTGAATTTGGTAACAGCCAAACGCACCCCAGCAATTCTGGTCTCAAATTTGTTCATAATACCCCTCATCCAGCATACTTCAGTGTTCTTAATAACGGCTCGAATCCATATGGTTCTAGAGAAAATCTGAGTGATGCTCCATCTTTGAACCATTCCTCTTATCCGTGCCCTCCGAACATGGGAAGAATACTAACTGTTGTAATTGTAATTCTTCTGTACACACATGAAGCTGATATTGAAGTTGCTTCACTGGAATACCTTTTGTAA 1842 0.4566 MEATNLSVSQLQPSDSDDVAFNDLNQLGSRQNSDAGASASGSGGARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLTKPQAVFGSVASAAFPVTTIFSNTNTVDDRKSGFFEFRPLSSTDMVPADFTNHVISEQFRQIDGPGLVQSYASSTLVKTETAVPSNNLCLSSTVQMVSSGASAPTEVDPDKLNQKGNASPGLQASLVDGRGNGLPVAAERISDDGYNWRKYGQKHVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPQPSRRYSAGTMMSIQEERTDKALSANQDDKSSNLHALVPHIAEPNSNPDQSPVPADSPEGVGLVSNRVNDEVDDDDDPFSKRSKMDTGIADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSTSHDTAGPTVAAGGQTRIRPEESDNISLDLGMGIRSAAENIPNRQGQFLLSEFGNSQTHPSNSGLKFVHNTPHPAYFSVLNNGSNPYGSRENLSDAPSLNHSSYPCPPNMGRILTVVIVILLYTHEADIEVASLEYLL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0988 613 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 ProSiteProfiles WRKY domain profile. 232 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 MobiDBLite consensus disorder prediction 195 215 - -
Alju07g0988 613 MobiDBLite consensus disorder prediction 1 39 - -
Alju07g0988 613 MobiDBLite consensus disorder prediction 1 44 - -
Alju07g0988 613 MobiDBLite consensus disorder prediction 467 490 - -
Alju07g0988 613 Gene3D WRKY domain 398 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 MobiDBLite consensus disorder prediction 336 381 - -
Alju07g0988 613 SUPERFAMILY WRKY DNA-binding domain 235 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 Gene3D WRKY domain 231 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 FunFam WRKY transcription factor 229 297 - -
Alju07g0988 613 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0988 613 FunFam WRKY transcription factor 33 398 464 - -
Alju07g0988 613 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 148 500 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0988 Alju-ChrAlju07 29732662 29738566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0988 50 588 WRKY Transcription Factor Family AT4G26640 55.311 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju07g0988 WRKY 3.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0988 07 29732662 29738566 Alju07g0988 07 29732662 29738566 ECH