Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0946 ATGAGGAAAGGCAGAGCAGCCGCGCCGTTGAAGACGACGGCTGAGGCGGCGGCTGGGGTCGAGGGAGGATCCGGATCGAGGACGGTTTTAAAAGAGCCGAGGTTCCGGGGCGTGAGGAAGAGGCCATGGGGTAGATTTGCGGCGGAGATCAGAGACCCTGTGAAGAAAGCTCGTGTGTGGCTTGGCACCTTCGATTCCGCCGAAGAAGCCGCTCGAGCATACGACGCCGCCGCCCTTAACCTACGTGGACCTAAGGCTAAGACCAACTTCCCGATCAACCCTTCCCTCTCACCCTTCTGTTACCACCACAACAATAACAACCCCACAGATCCGTTTTTAGATCACAGGTTGTATGCTTCTAATGGCTTCCAGGAGCACCAGATCAATCCTCAGAGACCTACTTCTAGCGGCATGAGCAGCACCGTCGAGTCCTTCAGCGGCCCTCGCCCTCGTTCGATTGCGCCGCCGTTGACCACCACCACCACCTCCCGGAGATACCCTCGGACGCCACCCGTCGTGCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCTTCTGTGGTTGACAACGACGGCGATGATATCGCCTCCTCCTCTTTCCGGCGGCCGTTCCCCTTCGATCTAAACCTCCCACCGGTCGATGATGATCTTCACTGCACCGATCTGCATCTCTGA 675 0.5822 MRKGRAAAPLKTTAEAAAGVEGGSGSRTVLKEPRFRGVRKRPWGRFAAEIRDPVKKARVWLGTFDSAEEAARAYDAAALNLRGPKAKTNFPINPSLSPFCYHHNNNNPTDPFLDHRLYASNGFQEHQINPQRPTSSGMSSTVESFSGPRPRSIAPPLTTTTTSRRYPRTPPVVPEDCHSDCDSSSSVVDNDGDDIASSSFRRPFPFDLNLPPVDDDLHCTDLHL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0946 224 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 MobiDBLite consensus disorder prediction 126 167 - -
Alju07g0946 224 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Alju07g0946 224 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 192 - -
Alju07g0946 224 MobiDBLite consensus disorder prediction 126 202 - -
Alju07g0946 224 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Alju07g0946 224 MobiDBLite consensus disorder prediction 1 26 - -
Alju07g0946 224 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Alju07g0946 224 MobiDBLite consensus disorder prediction 179 193 - -
Alju07g0946 224 FunFam Ethylene-responsive transcription factor 2 34 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0946 Alju-ChrAlju07 28014667 28015341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0946 1 224 AP2-EREBP Transcription Factor Family AT3G20310 56.917 1.96e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju07g0946 AP2 5.8e-16 CL0081