Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0924 ATGGAAGCTCATTCTTCTTCCTCAACGACGTCGTTTCTTCACCAGAAACGTCTCCTCCACGAGATGGATTTCTTCTATTCTGACAAAAAGACCAAGACTGATGATGCTGATGATCAACATGATCACCATGACGATGTGATGCTAAACGGATCCACAGAGCTTCACATTGATGCGAGTTTAGATCTTGTGACTAAGAGTAGCAGTAGCAACAGATCGACAATGGATGATGGAGCATCAGACGCCATGGAAGAGAACAAGAGAAAAGAGTATGCAGCTTTGTTAGCTGAATTGAAGCATTTGAAAGCTGAAAATCAACGTCTGAGAGATTTGCTTGATGAGGTGAACCAAGACTACAATGCCCTCCAATTGAGACTTATCAAGCTCAAGCAGACGCAAAGTAATGAGGTAGAAGAAGCTGGCAGTGGAGATAATAAAAGCGAAGGCAAAGTGATGATGAGAGAAAGCAAAAGCAATAATATGCTTGATCTGATGGAATGTAAGATTGGGCAAAGCAGAGATAGTGATCATCATCAGCCTCAAATTAACAACAATGATAATACTCATAACAAAGGTTATGGTGGGAAGGATATTCATGATAGTGATCAAGCAAGAGACACTTCATCAGATACCATATCGCTCGTCAGGAAAGCTCGCGTCTCAGTTCGAGCACGATCTGAGTCTTCAATGATATCAGATGGATGCCAATGGAGGAAGTATGGACAAAAGATGGCAAAAGGAAACCCTTGCCCACGAGCTTATTATCGTTGCTCTATGGGAACTTCTTGTCCTGTACGAAAACAAGTACAGAGGTGTGCCGAAGATAGAAGCATTCTGATAACTACATACGAAGGACAGCACAATCATCCACTTCCTCCAGCTGCAAAAGCTATGGCTTCCACAACATCTTCGGCTGCTTCGATGCTTCTTTCTGGATCAATTCAAAGTTCAGATCATCATCACAATAGCCTCATAAACCCTAATATCTTAGAAAGTGCTTCAATATTTGCTTCCCCACACAGCATGGCTACTCTCACAGCCTCAGCTCCATTTCCCACTATAACCTTGGACCTCACTCGTCATCAAATTACCCCGCCACCACCTCCGTCTCCGCCGAAGATTTTCGGTCAGGCTCTGAGTGATCAACACTCGAGGGTTTTTCCGGGAACAATGACGTCGTCATTCACTGATACGGTGAATGCAGCAACTGCTGCCATTACTGCGGATCCCAATTTCACTGCAGCTCTGGTGGCTGCCATTACTTCTGTCATTGGAAGCTCCCATTCCAATGGTAATAATGGCTCTGATATTACTTCAAGTGGAAAACCCTAG 1329 0.4387 MEAHSSSSTTSFLHQKRLLHEMDFFYSDKKTKTDDADDQHDHHDDVMLNGSTELHIDASLDLVTKSSSSNRSTMDDGASDAMEENKRKEYAALLAELKHLKAENQRLRDLLDEVNQDYNALQLRLIKLKQTQSNEVEEAGSGDNKSEGKVMMRESKSNNMLDLMECKIGQSRDSDHHQPQINNNDNTHNKGYGGKDIHDSDQARDTSSDTISLVRKARVSVRARSESSMISDGCQWRKYGQKMAKGNPCPRAYYRCSMGTSCPVRKQVQRCAEDRSILITTYEGQHNHPLPPAAKAMASTTSSAASMLLSGSIQSSDHHHNSLINPNILESASIFASPHSMATLTASAPFPTITLDLTRHQITPPPPPSPPKIFGQALSDQHSRVFPGTMTSSFTDTVNAATAAITADPNFTAALVAAITSVIGSSHSNGNNGSDITSSGKP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0924 442 SMART WRKY_cls 230 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0924 442 FunFam probable WRKY transcription factor 31 215 292 - -
Alju07g0924 442 SUPERFAMILY WRKY DNA-binding domain 223 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0924 442 MobiDBLite consensus disorder prediction 191 205 - -
Alju07g0924 442 Coils Coil 83 131 - -
Alju07g0924 442 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 432 IPR044810 GO:0003700
Alju07g0924 442 MobiDBLite consensus disorder prediction 170 210 - -
Alju07g0924 442 MobiDBLite consensus disorder prediction 175 190 - -
Alju07g0924 442 Gene3D WRKY domain 214 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju07g0924 442 ProSiteProfiles WRKY domain profile. 225 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju07g0924 442 Pfam WRKY DNA -binding domain 232 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0924 Alju-ChrAlju07 26238358 26244194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0924 21 430 WRKY Transcription Factor Family AT1G62300 42.443 5.52e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju07g0924 WRKY 1.1e-23 CL0274