Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0897 ATGACTACCAATAATACGGAGGAGGCAAAACATGAAGGCGAGAAGGCACTTGGCGGGGTGACCGGTGAAAGGGGAGGAGGAAGTGGTGGCGGCGCGGCGGCGTTGGAGGAGGTAGTTCTGAAGAAAGGACCGTGGACGGCGGCGGAGGACGCGGTTCTGATAGAGTACGTGACGAAGCATGGAGAAGGGAACTGGAATGCAGTGCAGAGAAATACAGGACTAGCTCGATGTGGCAAGAGTTGTAGGCTGAGATGGGCAAACCATTTGCGACCCAATTTGAAAAAAGGTGCCTTTTCTCCAGAGGAAGAGAAGCTCATCCTGGAGCTTCATGCACAATTTGGTAATAAATGGGCCCGCATGGCTGCTCTGTTACCAGGGCGTACGGACAATGAAATCAAGAATTATTGGAACACAAGAGTGAAGCGCCGTCAACGACAAGGTCTGCCTCTTTACTCCGACGAACCTGATCGTTCCACCACATCTCCGAGACCCATCGCCGCCACGCCTCTTCCTAATAATGCCTCACAGTTCGAGTTCCTTCATCACCATCACTTTCAACATTCTTTGCCTTCTCCTTCTCCACAAACCCAATATTCTCCTCTATCGTCCCCACTTCAGCCTAAGCCCACCATTTCTGACCCCATGATCCCTCTTTCTTCTCCTTCTTCTTCTTCTGTCACGTCCTCCCATTCCTTCGTCTTCAGCCGCCCCGCCCTCCTTCTCTCTAACCCTCTCACCTTCAAGCGATTCCGTACTTCTACAAGTTATCCCCTCCGGGTGACCCCAAATACTATTGTTACCTCTTCTTCGCTTCCGAATCAGCCCATGGCGCCACCGCCGCCTCAGTCGTCGGTTGGGTTTTCTGGATTCGGATATACGGGTCAAGTTAACTCGGGTTTGTCCCATAATATTTATCAAGCTCCATTGTTAGAGTATGACAATCGTGGAGGGCCATTGAACCAGTTTGGGAATCCCCCACCAAAACTACTTGAGCTCCCTTCAAACCAATTTTCTCCTCACCAGCCTAATAATAGTATTATGCATACAGAGAGTAATAAGTTTAACATGCAAATGAACCATACTGATGATGGTATGAAGAACAGTAGTGGTGGTGGTAATAACAATGGGTTTCTGGGAGACCATTTCTATGAAGCTCAGAGTTTGATACCTGGCCACCAAGCGACACTGAAGAAACGACGTTATTTCTATACAGATGACGGAAATGATCTTGACGGACACGGTAGCTTTGATGACTTGCCTCTTAACTCTTCTAGCTGGCCTTCAAATAATGCAGAACCGAAACAGAAGGAAGAAGCACAATACCTGAGTAAATCCATGAACGACGACCTATCTTCGATGATTGACGTTATGCCATCTTCACTGTCGGTTTCAGATTGGTCAACCAGCAATGCTGCGGAAGCTTCTAATAATAATTTTCAATCTTCTGGCGTTATTATTCCAGACGATAACTTTGGACTTGACACTAAACCCATTGCTTCTTTGTTTCCCATCTCAACCACTACAACAAATCATAATGACAACTCTGGATGTTACTCTTGGGACGACTTACCAGGATTTTGCTGA 1584 0.4741 MTTNNTEEAKHEGEKALGGVTGERGGGSGGGAAALEEVVLKKGPWTAAEDAVLIEYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDEPDRSTTSPRPIAATPLPNNASQFEFLHHHHFQHSLPSPSPQTQYSPLSSPLQPKPTISDPMIPLSSPSSSSVTSSHSFVFSRPALLLSNPLTFKRFRTSTSYPLRVTPNTIVTSSSLPNQPMAPPPPQSSVGFSGFGYTGQVNSGLSHNIYQAPLLEYDNRGGPLNQFGNPPPKLLELPSNQFSPHQPNNSIMHTESNKFNMQMNHTDDGMKNSSGGGNNNGFLGDHFYEAQSLIPGHQATLKKRRYFYTDDGNDLDGHGSFDDLPLNSSSWPSNNAEPKQKEEAQYLSKSMNDDLSSMIDVMPSSLSVSDWSTSNAAEASNNNFQSSGVIIPDDNFGLDTKPIASLFPISTTTTNHNDNSGCYSWDDLPGFC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0897 527 MobiDBLite consensus disorder prediction 418 436 - -
Alju07g0897 527 FunFam MYB-related transcription factor 41 94 - -
Alju07g0897 527 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 89 IPR017930 -
Alju07g0897 527 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 18 478 - -
Alju07g0897 527 MobiDBLite consensus disorder prediction 153 171 - -
Alju07g0897 527 CDD SANT 44 89 IPR001005 -
Alju07g0897 527 MobiDBLite consensus disorder prediction 413 438 - -
Alju07g0897 527 FunFam Transcription factor GAMYB 97 143 - -
Alju07g0897 527 Gene3D - 41 94 - -
Alju07g0897 527 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Alju07g0897 527 SMART sant 94 142 IPR001005 -
Alju07g0897 527 SMART sant 41 91 IPR001005 -
Alju07g0897 527 SUPERFAMILY Homeodomain-like 41 136 IPR009057 -
Alju07g0897 527 MobiDBLite consensus disorder prediction 1 31 - -
Alju07g0897 527 MobiDBLite consensus disorder prediction 146 171 - -
Alju07g0897 527 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 144 IPR017930 -
Alju07g0897 527 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Alju07g0897 527 Pfam Myb-like DNA-binding domain 95 138 IPR001005 -
Alju07g0897 527 CDD SANT 97 138 IPR001005 -
Alju07g0897 527 Gene3D - 97 143 - -
Alju07g0897 527 MobiDBLite consensus disorder prediction 185 210 - -
Alju07g0897 527 MobiDBLite consensus disorder prediction 188 210 - -
Alju07g0897 527 ProSiteProfiles Myb-like domain profile. 90 140 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0897 Alju-ChrAlju07 24538916 24542522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0897 18 240 MYB Transcription Factor Family AT4G26930 52.655 1.48e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g0897 Myb_DNA-binding 1.4e-12 CL0123