Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0886 ATGGTGAGAAAGAGAATGGCTTCTGAAATGGAAGTTCACACCACAGCCCATAACTCCACCGGCGCCGGAGATTATCATCTCCGGTTTCCCCGTCAGAGTACTGTGGTGGCTTCCTCCCTATTATCCACCGTAGATAAAGCAGCAGCAGCTTCAAGTAGTAATAACAGTAAGTATAATAGCTATCATTGTAAATCTGGTTCACGAGATAATGTTCCTATTCCTAACCCCACAACAGTGACTCTCTCCAACAACTACTCCACTACCACTCTTCTACCTTCTTCCACTAATCTCCCCGCCGTGACGTCACCCAGCTACAGCAATCGTCACTGCGGTGAAAACCTCTCTCTTCTTCATCTTCAAGCCCTTCAACCTCAGACCCAGCAGGACCCTTTGCCTCCTACTCCTGCGGTGTGTGGGTTTTCCGGCTTGCCTTTATTTCCGTCTGAAAGTAATCGGGTTGATAACACCGGTACTAGTACTGCTCCGGCGGTCGACGGTGTTGCTTCGGTGGCCACAAACGCCGACGCCGGCCGACCTTCTTCTTGTTCGTCATCTTCTATGGAGGATAGTTCAGCTTTGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACCGCCGTGTCCATCCCACAGCTCATCAACAACGTTAGGGAGATTATTTATCCTTGTAACCCCAACCTTGCTGTCATTCTTGAATACAGACTCCGCCTGCTTACTTCCGCCAATACTACTTCTGAATCTGTTCTAAATTATGGTGACAAGAAGAGAACGGAACCGCCGCCTCCTCCTCCGATGGTGCCGGTGGCGGCCGTGGCTTTAAACCAGAGGCCTTTTGGTCAGCAAGTAGTAGGCCCATCTTTTGCCGCCATAGCTCCCAACTTGCATATTCCAAACTCTTCCATTGTTTCTCCATCTGTTGGGAACCAGATATACTCAAATTGGGGACTACCACCTACGGTGACGGCCTTAACCCATGACGGCGCCAACCACCCGTCGGTGATTACCTTACCACTATCTCCACTATCATCGTCAAATCATCAAGGTCATTCGCCACAGGAAGAGCAACAATTTCATGAGAAAGAACAAGAGAATCAGAACCAGCAACAAGAAGAGGGGGTTTCAGTTTCTTCCCCTTGTGATAATAATCGAACAGCAACAACAGCGGCGGCGGTGGGCGGCTCAGCTGCTGAAATCATGCTAGCAAAAAAGAAGAAAGAAGAGATGCAGCAACAGAAGAGAGACGAAGAAGGCTTACACCTCCTAACTTTGCTGCTTCAGTGTGCGGAGGCTGTGGCGGCTGATAACTTCGATGAAGCCAATAAGATGTTGCTGGAGATTTCACAACTCTCCACACCGTTCGGCACGTCGGCGCAGCGGGTGGCGGCGTATTTCTCGGAAGCCATTTCTGCGAGGCTGATTAACTCATGCTTGGGAATATACGCTGCTCTTCCAATGGTTCCTCATAGCCAAAAGATGGTATCAGCTTTCCAAGTTTTCAATGGGATGAGTCCATTCGTTAAGTTTTCACACTTCACCGCGAATCAAGCTATACAAGAAGCTTTCGAGAGGGAAGGGAGGGTGCACATCATAGATCTAGACATAATGCAAGGACTACAATGGCCTGGCTTGTTTCACATTCTGGCTTCAAGAGCTGGTGGACCCCCTTACGTCAGGCTTACGGGGCTTGGCACCTCCATGGAAGCTCTTGAAGCTACGGGCAAGAGGTTGTCTGATTTTGCAAATAAATTGGGACTTCCTTTTGAGTTCTTTCCGGTGGCCGACAAAGTTGGGAATCTTGACCCTGAGAGGTTATGTGTAAGCAAGGCAGAAGCTGTGGCCGTCCACTGGCTCCAACATTCCCTTTATGATGTCACTGGTTCTGATACTAATACTTTGTGGCTTTTGCAAAGGTTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGATCTGAGCCACGCGGGGTCATTCTTAGGGAGGTTTGTGGAAGCCATACATTACTATTCAGCACTATTTGATTCGCTGGGATCAAGCTATGGGGAGGAGAGTGAGGAGAGACACGTGGTGGAGCAGCAGCTTCTGTCGAGGGAGATTCGAAACGTGCTGGCTGTCGGAGGTCCGTCGAGGACCGGCGAGCTCAAGTTCCATAACTGGCGGGAGAAGCTGCAGCAATGTGGGTTCCGAGGTATCTCCCTCGCCGGAAACGCCGCCACGCAAGCCAGCCTTCTTCTCGGCATGTTCCCTTCCGATGGGTATACCTTGGTGGAAGATAATGGCACACTCAAACTTGGTTGGAAAGATCTCTGCTTGCTTACTGCTTCTGCTTGGAGACCTTCCTTCCATAATAATTCCAACGCCGCCATCGTCCACCATGGTTGA 2385 0.5019 MVRKRMASEMEVHTTAHNSTGAGDYHLRFPRQSTVVASSLLSTVDKAAAASSSNNSKYNSYHCKSGSRDNVPIPNPTTVTLSNNYSTTTLLPSSTNLPAVTSPSYSNRHCGENLSLLHLQALQPQTQQDPLPPTPAVCGFSGLPLFPSESNRVDNTGTSTAPAVDGVASVATNADAGRPSSCSSSSMEDSSALAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSANTTSESVLNYGDKKRTEPPPPPPMVPVAAVALNQRPFGQQVVGPSFAAIAPNLHIPNSSIVSPSVGNQIYSNWGLPPTVTALTHDGANHPSVITLPLSPLSSSNHQGHSPQEEQQFHEKEQENQNQQQEEGVSVSSPCDNNRTATTAAAVGGSAAEIMLAKKKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYAALPMVPHSQKMVSAFQVFNGMSPFVKFSHFTANQAIQEAFEREGRVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVADKVGNLDPERLCVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNNSNAAIVHHG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0886 794 MobiDBLite consensus disorder prediction 334 393 - -
Alju07g0886 794 Pfam GRAS domain family 424 779 IPR005202 -
Alju07g0886 794 MobiDBLite consensus disorder prediction 370 392 - -
Alju07g0886 794 ProSiteProfiles GRAS family profile. 414 779 IPR005202 -
Alju07g0886 794 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 376 774 IPR005202 -
Alju07g0886 794 MobiDBLite consensus disorder prediction 355 369 - -
Alju07g0886 794 Coils Coil 353 373 - -
Alju07g0886 794 Coils Coil 401 421 - -
Alju07g0886 794 MobiDBLite consensus disorder prediction 49 73 - -
Alju07g0886 794 MobiDBLite consensus disorder prediction 1 25 - -
Alju07g0886 794 MobiDBLite consensus disorder prediction 338 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0886 Alju-ChrAlju07 24102482 24105017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0886 372 780 GRAS Transcription Factor Family AT3G54220 81.598 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju07g0886 GRAS 4.3e-123 CL0063