Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0860 ATGGGGTCCGACATTTGCGGGAATACTCCGTGCGAAGCGGTCACTGCACACGAATGGAAGAAGGGGTGGCTGCTACGATCCGGTGGATTTGCCAAACTCTGTGATAAGTGCGGATCTGCCTATGAAAAATCAGTTTTCTGCAAAGAGTTCCACCTTGAAGAATCTGGTTGGAGGGAGTGCAACTTCTGCAAAAAGCCTATTCACTGCGGATGCATAGTGTCTAAATCTTTGTTCGAGTATCTAGATTTTGGCGGCATAGGCTGTATTAGCTGTGTAAAGTCTCCCCAACTTCATTTGATGCAAAATAGTGAAATTTCTAATGGGTGTATTACATCTGCCAAAAATGTTGCAAGTGAACGACCTTCTTTGCATATTGATGGTAGAATCTCTGTGGATAGTGTTCATGAAGGCAAACTTATGCAACTGTGCAAAATTGTTGAAGCTAGTGAATCTAGCCACTGGTCTCAAGTTCAGAAAGATGGAATACTTCTATCTAGTGGGCAGAACAGCCAGGAAGTTAAGTGTCCAATCAGGGAAGTGGATGCAGGATTTTCAAATGTGATGAATCCATCTGTTCAGTCATTAACATTTGCCAAATTAGAAAATAGCAGACCAGCTTGGGAGCCAAAAAATATGCATGAATTGCCTGTGCAGCCATCATTATGTATGTCTCTGAGAACTCCATCAGGAAACTCTGTCCTGCCTTCAGCTGGAGAGATTGTAGAAGGAAGAGTTGAGGAAAAACCATCTCCTTTTCATCAAGGGCAAAGATCTCGGCCTATATTGCCCAAACCAACAAAGACTGGACTAACCATAAATCAAGAAACAAATAAAGGTGTGCTTTCTCATCCGCGAATAGCCCGACCACCTGCTGAGGCAAGGGGCAAGAATCAGTTGCTTCCTCGATACTGGCCCCGGCTTACTGATAAAGAACTAGAGCAATGGTCTGGAGATTTGAAGTCCACTGTAGTGCCACTATTTGAGAAGGTGTTGAGTGCCAGTGATGCTGGTCGAATTGGTCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAGTCAGAAGGTCTTCCTTTGCGGATCCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTTCGATTTTGGCCCAATAACAACAGTAGGATGTATGTTTTGGAGGGTGTGACTCCTTGCATACAGTCCATGCAGTTACATGCTGGTGATACCGTAATATTTAGTCGGATAGATCCTGGAGGCAAACTTGTTATCGGTTTCAGGAAGGCATCTAACTCTGTAGATACACAGGATGCCTCTACATCTGCACCTTCAAATGGCATTTCAGTGAAGGATACTTCTTGTTCTGGGCTCACTGATAATCTTCACTCCAGAAACAGTTATCCTGTTCCTCCCCAGTTGGTGAAGGTGAAGAGGGAAGCTTACTCAAACGGACTTTCAGAACATCTGCATTTGAATAGTATGGATGCTGGTTTGCCTAAGTCTGAAAATTGTGGGAGCATGACAAACAATGATTCCTTGCAGCAGCCAATTTCAGTTTCAGAGAAGAAAAGGACTCGAAATATTGGGTTTAAAAGTAAGAGGTTGCTCATTCGTAGTGAAGATTCCATGGAGTTGAGACTTACTTGGGAAGAAGCTCAGGACTTGCTTCGTCCACCGCCTAGTGTCAAGCCAAGCATTGTTACGATAGAGGACCATGTGTTTGAAGAGTATTATGAACCACCTGTTTTTGGAAAGAGGACTTTTTTCACTACACATTCATCTGGGAGACAAGATCAATGGGCTCAATGTGATGATTGCTGTAAATGGCGAAGGCTGCCGATAGATGTTCTACTTCCTCCTAAGTGGACATGCTCAGAAAATGGGTGGGATGATAGCAGGTCTCTGTGTTCTGCTCCAGAGGAGCTCATTCCAAAGGAGTTGGAAAATCTTCTGAGAACTAGCAAAGGTTTTAAGAAGAAAAGAATTGCAGAAGACAGGAAGTCAGCCCAAGAGCATGAAACTTCCGGCTTAGATGCCCTTGCCAGTCTGGCAGTTCTAGGAGAAAATTTTCTTGCCCCTGCCGAGTCATCTGCAGGAGTCACCACCAAACATCCTCGACACCGTCCAGGATGCACCTGCATAGTGTGCATCCAGCCACCAAGTGGGAAGGGGAGACATAAGCCGACATGTACTTGCAACGTGTGCATGACTGTGAAACGCCGTTTCAAAACCCTTATGATGCGTAAAAAGAAACGCCAATCAGAACGTGAAGCAGATGCCACTGAGAAGGAACAAGTCCACCACCAGAGGGATGAATCTGAAATGAATGGCGCATCAAGAGACGATACGGTTTGTATAGAAGAAAACGGGGAAGGCTTAGCCAGAGGTCATCCTGAGGTGAGTGATCCCAGTACTGGACAAATAGATCTGAATTGTCATCCCAAACGTGAAGACATGCTTGTTGATGAAACAGAACTGAGCATGACTAGTCATCTTGAAACAACTAACTATCTACGATAA 2514 0.4447 MGSDICGNTPCEAVTAHEWKKGWLLRSGGFAKLCDKCGSAYEKSVFCKEFHLEESGWRECNFCKKPIHCGCIVSKSLFEYLDFGGIGCISCVKSPQLHLMQNSEISNGCITSAKNVASERPSLHIDGRISVDSVHEGKLMQLCKIVEASESSHWSQVQKDGILLSSGQNSQEVKCPIREVDAGFSNVMNPSVQSLTFAKLENSRPAWEPKNMHELPVQPSLCMSLRTPSGNSVLPSAGEIVEGRVEEKPSPFHQGQRSRPILPKPTKTGLTINQETNKGVLSHPRIARPPAEARGKNQLLPRYWPRLTDKELEQWSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLHAGDTVIFSRIDPGGKLVIGFRKASNSVDTQDASTSAPSNGISVKDTSCSGLTDNLHSRNSYPVPPQLVKVKREAYSNGLSEHLHLNSMDAGLPKSENCGSMTNNDSLQQPISVSEKKRTRNIGFKSKRLLIRSEDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDHVFEEYYEPPVFGKRTFFTTHSSGRQDQWAQCDDCCKWRRLPIDVLLPPKWTCSENGWDDSRSLCSAPEELIPKELENLLRTSKGFKKKRIAEDRKSAQEHETSGLDALASLAVLGENFLAPAESSAGVTTKHPRHRPGCTCIVCIQPPSGKGRHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREADATEKEQVHHQRDESEMNGASRDDTVCIEENGEGLARGHPEVSDPSTGQIDLNCHPKREDMLVDETELSMTSHLETTNYLR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0860 837 MobiDBLite consensus disorder prediction 748 776 - -
Alju07g0860 837 FunFam B3 domain-containing transcription repressor VAL1 305 432 - -
Alju07g0860 837 MobiDBLite consensus disorder prediction 248 271 - -
Alju07g0860 837 SUPERFAMILY DNA-binding pseudobarrel domain 324 427 IPR015300 -
Alju07g0860 837 Pfam CW-type Zinc Finger 597 639 IPR011124 GO:0008270
Alju07g0860 837 Pfam B3 DNA binding domain 327 427 IPR003340 GO:0003677
Alju07g0860 837 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 4 832 - -
Alju07g0860 837 SMART B3_2 327 428 IPR003340 GO:0003677
Alju07g0860 837 ProSiteProfiles B3 DNA-binding domain profile. 327 428 IPR003340 GO:0003677
Alju07g0860 837 MobiDBLite consensus disorder prediction 431 451 - -
Alju07g0860 837 Gene3D - 305 432 IPR015300 -
Alju07g0860 837 ProSiteProfiles Zinc finger CW-type profile. 592 642 IPR011124 GO:0008270
Alju07g0860 837 MobiDBLite consensus disorder prediction 744 780 - -
Alju07g0860 837 Gene3D - 588 640 - -
Alju07g0860 837 CDD B3_DNA 325 426 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0860 Alju-ChrAlju07 22175795 22184577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0860 1 817 B3 DNA Binding Superfamily AT2G30470 50.303 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju07g0860 B3 7.1e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1330 08 10159374 10168840 Alju07g0860 07 22175795 22184577 CCT
Alju07g0860 07 22175795 22184577 Alju07g0860 07 22175795 22184577 ECH