Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0844 ATGGAGATATCGTTGTTAAACGTTCTTGTTAATGGGATAACCTCGTTTTTGCACTCAGAAATTTCCAGAAACTTGGGTTCAGAACCAATCCTAAAGTATTACCAAAAGGAAGAGCAGATACTTAAGTTCTTAAAGCCAATACTTGAAGCCATAGCTAATACAGATTTAGCTTCTGATGAAGTGCTTTTGGAGATATTTGAAGAACTGAATCAGGCAGTGCATGAACTGAGGGAGCTTTTCGAGAGTTGGCAACTATTGTGTAGTAAAATCTACATTATTCTGCAAGTTGAATCCTTGATATCTAAGATTCAGATTTGGGCACTAAACATTTTCAAGCAACTAAAGGCTTCCCATCAACGTATGCCTAATGAACTAAGTCTTTCACACATAGAGCACTGTATTGAGAACATAAAGAATTTGGGACATGAAGAAACATCATCATCTATAATCAAGGAAGCTATCATGGAACAAAAGGAAGGCTTAGGACCGAGTTCCGTGGTCCTTGAAAAACTTGCTGAGAACCTAGGCCTGAGCTCTAATCAAGAGCTTCTAATGGAGGCTGTGATACTTGAAAAGTTGAAAGAGAATGCAGAACAGATTGAAAATAATACAGAAGCTGAATATCTCAACCAGATAATTGCTCTTGTCACTTGTATTCATGAGAAACTTATAATCCTCAAGGAAGCCCAGATGTGTAGCCCAGTTCCAATACCTCCAGATTTTTGCTGCCCTCTCTCTTTGGAGTTGATGAAAGATCCTGTGATTGTGTCGTCCGGGCAAACTTACGAGCGAGCTTTCATTAAGAACTGGATTGATCTAGGGCTCACCGTCTGTCCAAAGACGCATCAGATTTTGTCTCGTACAAACCTGATACCAAATTATACTGTGAAGGCATTGATTTCAAATTGGTGTGAATTGAACAATGTCAAGCTAGTTGATCCTATTGTGTCCTCAAATTTAGAAGGTTCAAGTGACATGATTTGTAGCCAAAGTTTGGATATTTTAAGAATATCACAAACAAGTTCTGATAACATGTCTCCTAGCTTGGATGAAATGAAGGTGGATTCAGATGGCCAAGATTCTAAGTCAACTCCATCTAGAAGGGAATCTTCCAATGACTTCAACCAAGATTCCAATGCATTTTTTAATGAAAATTTTCCTCAAGGAACAAAAGGTGATGATGGCACTAATGCTTCTCAGCCATTGGACAATCCAAGTGAAAACAAAGATGCTTCTAGAGAGGTCAATCTAAGGTCAGATTTAGCTAGTCCTCGAACGTTAGAAGCAAAGTCTCAAATCTTAAATATATGGCAGCAACCATCAAAGAATTTAAGGTTAGCATCTTCACCTGTAAGTCCTTCTGGTATTGAAACCCTAGTTCTGAATTTGGCTAAGGACTTGAAGAGCTCTTCAATTAATACTCAGAGAGAAGCAACAACACAACTTCGCCTTCTTTCTAAGCACAATATGGAGAATAGAATTGTGATTGCGAATTGTGGAGTCATTAGCTTACTAGTGGAGCTGCTTCAGTCAACTGATACAAAGATCCAAGAAAATGCTGTTACAGCTCTTCTAAACTTATCAATCAATGATAATAACAAAGTTGAAATTGCAAATGCTGGTGCAATTGATTCTCTTATTCATGTTCTTGAAACAGGAAGTCCTGAAGCCAGAGAGAACTCGGCAGCCTCACTTTATAGCCTATCAATGATAGAAGAAAATAGGATTAGGATAGGGAGATCAGGGGCAGTTAAGCCACTGGTTGATTTGCTAGAAAATGGAACTTTAACTGGGAAAAAAGATGCTTCCACTGCTTTGTTCAACCTGTCTATATTTCATGAAAACAAGGGCCGGATCGTGCAAGCTGGCGCCGTGAAGCACCTCGTGGAGTTGATGGATCCAGCAGCCGGGATGGTGGAGAAGGCGGTGGCTGTTTTGGCGAATCTTGCATCAATTCCCGAAGGTAGAAATGCAATTGGTAATGAAGGAGCTATTCCTATTCTAGTTGATGTTATTGAATTGGGTTCTGCAAGAGGCAAAGAAAATGCAGCTGCCACTCTTCTACATATTTGTTCAAATAGTACCAGATTCTTAAACCTTATGATCCATGAAGGAGCTATCCCACCATTAGTAGCATTGTCACTATCAGGCACCCCAAGGGCCAAAGAAAAAGCACATGCTCTACTTAACCATTGTAGAAGTCAAAGACATGGTAATGTAATAAGAAGTTGA 2232 0.3943 MEISLLNVLVNGITSFLHSEISRNLGSEPILKYYQKEEQILKFLKPILEAIANTDLASDEVLLEIFEELNQAVHELRELFESWQLLCSKIYIILQVESLISKIQIWALNIFKQLKASHQRMPNELSLSHIEHCIENIKNLGHEETSSSIIKEAIMEQKEGLGPSSVVLEKLAENLGLSSNQELLMEAVILEKLKENAEQIENNTEAEYLNQIIALVTCIHEKLIILKEAQMCSPVPIPPDFCCPLSLELMKDPVIVSSGQTYERAFIKNWIDLGLTVCPKTHQILSRTNLIPNYTVKALISNWCELNNVKLVDPIVSSNLEGSSDMICSQSLDILRISQTSSDNMSPSLDEMKVDSDGQDSKSTPSRRESSNDFNQDSNAFFNENFPQGTKGDDGTNASQPLDNPSENKDASREVNLRSDLASPRTLEAKSQILNIWQQPSKNLRLASSPVSPSGIETLVLNLAKDLKSSSINTQREATTQLRLLSKHNMENRIVIANCGVISLLVELLQSTDTKIQENAVTALLNLSINDNNKVEIANAGAIDSLIHVLETGSPEARENSAASLYSLSMIEENRIRIGRSGAVKPLVDLLENGTLTGKKDASTALFNLSIFHENKGRIVQAGAVKHLVELMDPAAGMVEKAVAVLANLASIPEGRNAIGNEGAIPILVDVIELGSARGKENAAATLLHICSNSTRFLNLMIHEGAIPPLVALSLSGTPRAKEKAHALLNHCRSQRHGNVIRS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0844 743 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 500 542 IPR000225 GO:0005515
Alju07g0844 743 SMART Ubox_2 240 303 IPR003613 GO:0004842|GO:0016567
Alju07g0844 743 Pfam U-box domain 237 307 IPR003613 GO:0004842|GO:0016567
Alju07g0844 743 Pfam Armadillo/beta-catenin-like repeat 614 651 IPR000225 GO:0005515
Alju07g0844 743 Pfam Armadillo/beta-catenin-like repeat 573 610 IPR000225 GO:0005515
Alju07g0844 743 Pfam Armadillo/beta-catenin-like repeat 491 528 IPR000225 GO:0005515
Alju07g0844 743 FunFam RING-type E3 ubiquitin transferase 447 738 - -
Alju07g0844 743 SUPERFAMILY ARM repeat 459 732 IPR016024 -
Alju07g0844 743 ProSiteProfiles U-box domain profile. 236 310 IPR003613 GO:0004842|GO:0016567
Alju07g0844 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 311 IPR013083 -
Alju07g0844 743 Gene3D - 429 742 IPR011989 -
Alju07g0844 743 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 623 664 IPR000225 GO:0005515
Alju07g0844 743 MobiDBLite consensus disorder prediction 368 406 - -
Alju07g0844 743 Coils Coil 180 210 - -
Alju07g0844 743 MobiDBLite consensus disorder prediction 353 367 - -
Alju07g0844 743 PANTHER U BOX DOMAIN-CONTAINING 29 732 - -
Alju07g0844 743 SUPERFAMILY RING/U-box 234 313 - -
Alju07g0844 743 FunFam RING-type E3 ubiquitin transferase 236 311 - -
Alju07g0844 743 SMART arm_5 489 529 IPR000225 GO:0005515
Alju07g0844 743 SMART arm_5 571 611 IPR000225 GO:0005515
Alju07g0844 743 SMART arm_5 530 570 IPR000225 GO:0005515
Alju07g0844 743 SMART arm_5 652 692 IPR000225 GO:0005515
Alju07g0844 743 SMART arm_5 612 651 IPR000225 GO:0005515
Alju07g0844 743 CDD RING-Ubox_PUB 238 290 IPR045210 -
Alju07g0844 743 MobiDBLite consensus disorder prediction 341 416 - -
Alju07g0844 743 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 582 624 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0844 Alju-ChrAlju07 20260692 20263959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0844 1 742 U-box Gene Family AT5G67340 48.859 0.0 642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1291 08 9743891 9754493 Alju07g0844 07 20260692 20263959 CCT