Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0836 ATGTCGGATGACCCATGCGCCACTCCATTGAAACTAGTATATTGACAACAACTCTTTGACCTCCAACAGTCGGTCCAAAGAGATTTTCTAGACGGAGGTTTTGGTTCCCGTCTAGGGACACTGATCCTACGGCGTCAGAGGCCCAAAAAAAAAAAAAAAAAAACCGGCCAGATTATGGCGTCATCGTCGAGCAGTGGATTGACATTCAAGCTTCATCCCGTGGCGATAGTCAACATATCGGATCATTATACTCGGGTTAAGATGCAGATGAACCCGCCCAATGCATCCCATCAGAGAAGCCCCACCGCCGCTAACACTAATGCTGCCGACGGAATGGTTTTCACTCCTCCTAGGGTATACGGATGCGTGATAGGAGTACAGAGAGGACGCACCGTGGAGATCTTCAATAGCTTCGAACTTCTTTACGACCCTTCTACCCATTCCCTCGATCGTTCTTTTCTTGAGAAGAAGCAAGAGCTCTACAAGAAGGTTTTCCCCCACTTCTACATACTGGGATGGTATTCAACTGGGAGCGATGCCCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCTGTGTATGTACTTCTGAATCCTTCGATCAATCATGCTCAGAAGGATCTCCCAGTTAGTATTTTTGAAAGTGAACTGCATGTAATTGATGGGATTCCACAACTGATCTTTGTTCGCTCGAGCTACACTATTGAGACTGTTGAAGCAGAACGGATTTCAGTTGATCATGTTGCACATCTTAAGCCATCGGATGGCGGTTCAGCTGCTACACAATTGGCTGCTAACCTTACTGGTATGCACAGTGCTATTAAAATGCTGCATAGCAGAATTAAGGTGCTGCATCATTATCTTCTTGCAATGCAGAAAGGTGAAGTCCCTTGTGACAATTCTCTGCTAAGACAAGCATCAAGTCTCCTGAGAAGATTGCCAGCAATTGAATCTGGGAAATTCCAAGATGATTTCTTGATGGAATACAATGATACCTTATTGATTACTTACCTTGCTATGATGACTAACTGCTCAAGTGCAATGAACGAACTGGTAGACAAATTCAATACTGCATACGACAGGCATAGCAGAAGGGGTGGGCGAACTGCTTTTATATGA 1137 0.4433 MSDDPCATPLKLVYXQQLFDLQQSVQRDFLDGGFGSRLGTLILRRQRPKKKKKKTGQIMASSSSSGLTFKLHPVAIVNISDHYTRVKMQMNPPNASHQRSPTAANTNAADGMVFTPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAANLTGMHSAIKMLHSRIKVLHHYLLAMQKGEVPCDNSLLRQASSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMMTNCSSAMNELVDKFNTAYDRHSRRGGRTAFI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0836 378 ProSiteProfiles MPN domain profile. 96 225 IPR037518 -
Alju07g0836 378 CDD MPN_CSN6 67 374 IPR033859 GO:0000338|GO:0008180
Alju07g0836 378 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 197 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju07g0836 378 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 59 369 - -
Alju07g0836 378 Gene3D Cytidine Deaminase, domain 2 55 259 - -
Alju07g0836 378 SMART pad1_6 68 224 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju07g0836 378 FunFam COP9 signalosome subunit 6 59 259 - -
Alju07g0836 378 Pfam Maintenance of mitochondrial structure and function 245 359 IPR024969 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0836 60 364 Eukaryotic Initiation Factors Gene Family AT2G39990 23.226 1.77e-08 53.5