Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0818 ATGGGGGGTTCTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACGAAGGAGTGCATTTTCGCTCCTTACTTTCCTTCTGATGATCCTCACAAGTTCGCCATCGTCCATAAGGTCTTCGGTGCTAGCAATGTCAGCAAAATGTTGCAGGAGCTTCCGGTGCATGAAAGAGCGGATGCGGTGAGCAGTCTGGTTTATGAGGCGAATGCGAGAGTTAGAGATCCGGTGTATGGATGCGTAGGAGCCATATCATATCTGCAAAGTCAAGTTTCACAGCTAAAAATGCAGCTTGCGGTGGCTCAAACAGAGATTATGTGCATCCAGATGCAGCAAGATCCTACAAACTTATCAACTCAGATTGATAATTACCAAGACGACAAGCCACTAATCTTGTCTGATAATAACTATGAAAGCAGCAATATTCATAACAATAATTATCTCAGCTTTGCGTCTTCTTCCTCCTCGTCTAGTAATGTTATGCAAGACCCTTTTAAGAGAGAGTCATATTGGAGTTAG 522 0.4425 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVHERADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLKMQLAVAQTEIMCIQMQQDPTNLSTQIDNYQDDKPLILSDNNYESSNIHNNNYLSFASSSSSSSNVMQDPFKRESYWS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0818 173 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Alju07g0818 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 143 - -
Alju07g0818 173 MobiDBLite consensus disorder prediction 153 173 - -
Alju07g0818 173 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0818 Alju-ChrAlju07 16153539 16154554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0818 3 173 AS2 family AT2G30130 65.608 7.13e-78 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju07g0818 LOB 2.1e-42 No_clan