Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0781 ATGCTGCCCATCTCAATGGCCTCTCAAGACAATTACTTTCACATCTTCCAATGGCATCTCATTGAAATAAATCACTCAAACTTCAACTCATACAGCCATGGCATCTTCCTCCTACTTTTCTTCTTCTCCGTTGTCATTCTGATCGCCGTGTCGTTCCTTCTCGCCCACTTATGTCGCCGGTGGCGAGGTAGCGCCGCCTCTCAGGCCGCCCCTGCAGCCACTAGTTTTCATTGGGGTAAGTTAGAGATGGGATCAATGGAGAATAATAAGAGTGTTACGGGAGACACAAATGTAGAATGCTGCATATGTTTGAGTGTGTTAAAGGAAGGAGGAAAAGTGAAGGTGTTGCCAGAATGTGAGCATGCTTACCATTCAGAGTGTGTGGAGATGTGGTTAAGTGCAAACCCTAGTTGTCCTCTTTGCAGGGCTTCACTTCATAGATTTATGAGTAATACTATCAACAACAACAATAATGTATGA 480 0.4458 MLPISMASQDNYFHIFQWHLIEINHSNFNSYSHGIFLLLFFFSVVILIAVSFLLAHLCRRWRGSAASQAAPAATSFHWGKLEMGSMENNKSVTGDTNVECCICLSVLKEGGKVKVLPECEHAYHSECVEMWLSANPSCPLCRASLHRFMSNTINNNNNV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0781 159 SUPERFAMILY RING/U-box 94 149 - -
Alju07g0781 159 SMART ring_2 100 141 IPR001841 -
Alju07g0781 159 SMART FANCL_C_2 96 149 - -
Alju07g0781 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 148 IPR013083 -
Alju07g0781 159 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Alju07g0781 159 Pfam Ring finger domain 99 142 IPR001841 -
Alju07g0781 159 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 27 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0781 Alju-ChrAlju07 13310359 13310838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0781 15 146 C3H Transcription Factor Family AT3G11110 34.752 2.64e-16 70.1