LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g0779	ATGGTGAACATTAGCTCTCTACATGATTCTGATTCTTCAATGGCTTCTTGGGTTCGAGGTCGGTGTTTAGGTAAGGGCTCGTTTGGCACTGTGACGATCGGAGTGAGTAAGTCAGACGGTCGGGTTTTTGCGGTGAAGTCCGTGGATCTTCATTCGGGTCAGGTGGCGGCTTTGGATAATGAGATTCGGATCCTTCGGAGCCTGTCGTCGCCGTACGTGGTGAGCGTTCTCGGCGACGATGCTACGACGTCGTATCGGAACTTGTATTTGGAGTACCTGCCAGGTGGCACCCTTGCTGACCTAGCGTCTCGGCAGAATGGCGGGAGATATGCTGACGTGGACGAGCGCGTGGTGAGGTACTTCACCTGGTGTGTGGTGAACGCGCTGAGGTACGTTCACGCGAGGGGCGTCGTCCATTGCGATGTCAAAGGAAGGAACGTTCTGGTCGGGCTCAATGGCGGCGTGGCCAAGCTCGCTGACTTCGGCTCGGCCGTGGAGCGGTACTCCTCCGGTGCGGTGGCGGTAGATATCGTGCCACGTGGAAGCCCGCTGTGGATGGCGCCAGAGGTGATTCGGCGGGAGTCTCAGGGACCGGAATCTGACGTGTGGTCATTAGGATGCACGGTGATTGAGATGGTCACCGGGAAGCCAGGCTGGGACGACGACGACGGATTTAACACGCTGAGTCGAATCGGATACTCAGATGAGTTGCCGGAGTTTCCGAGTCAATTGTCAGAACTCGGACGCGACTTCCTCGGCAGGTGCCTGAGTAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGCTGCAGCATCCATTCTTGCTTCATACTTCTCCTAATAAGCTCGCAGATTCGTCTCCTCGGTGCATCCTCGATTGGATAAACTCAGACGAATTCAAGGAAGAAGACGAAGAAGAAACCAGAATGAACAATGAAACCTCAGCGAATGAGAGAATCGGTAAACTAGCTTCAAATTCAAGGGTAAATTGGGAAGTTGAGGATGATTGGTTGGAGGTGAGGGCATTGGGGTCCAACAGAGAATCAACAGTACCAGTCACTAGTGGGAGGGAAGACGAAGATGAAGGGACAAGTTCGGAATATGAGGATTTGAGGAGGGCAGAAAAGGGAATAGAATTAGGGATAAGTAGGGAATTGAAAATGGGAAGGGCAAATGTGGGAATATGGAATTGGGTCGAGGATCACAGTGAAAATGATAGGAGATATGGGTATGGGCAGCACAAGTTGGATCTGTTGAGAAAGACAAGGGCAATAACATTCATTTACAGCTTGTGGTGTTATTGTTGGTGTAGTTTGATATTAAAAATTAATTACTTATTTCAAATACATTTAAATATATTACTTTATCCCTCCCTCTCTTTTATTCAGTTCAGCTGA	1398	0.5036	MVNISSLHDSDSSMASWVRGRCLGKGSFGTVTIGVSKSDGRVFAVKSVDLHSGQVAALDNEIRILRSLSSPYVVSVLGDDATTSYRNLYLEYLPGGTLADLASRQNGGRYADVDERVVRYFTWCVVNALRYVHARGVVHCDVKGRNVLVGLNGGVAKLADFGSAVERYSSGAVAVDIVPRGSPLWMAPEVIRRESQGPESDVWSLGCTVIEMVTGKPGWDDDDGFNTLSRIGYSDELPEFPSQLSELGRDFLGRCLSREPSERWSCDQLLQHPFLLHTSPNKLADSSPRCILDWINSDEFKEEDEEETRMNNETSANERIGKLASNSRVNWEVEDDWLEVRALGSNRESTVPVTSGREDEDEGTSSEYEDLRRAEKGIELGISRELKMGRANVGIWNWVEDHSENDRRYGYGQHKLDLLRKTRAITFIYSLWCYCWCSLILKINYLFQIHLNILLYPSLSFIQFS	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g0779	465	CDD	STKc_MAPKKK	16	275	-	-
	Alju07g0779	465	FunFam	Serine threonine protein kinase putative	15	324	-	-
	Alju07g0779	465	Pfam	Protein kinase domain	19	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g0779	465	MobiDBLite	consensus disorder prediction	353	368	-	-
	Alju07g0779	465	ProSitePatterns	Protein kinases ATP-binding region signature.	23	46	IPR017441	GO:0005524
	Alju07g0779	465	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	137	149	IPR008271	GO:0004672\|GO:0006468
	Alju07g0779	465	PANTHER	CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED	10	362	-	-
	Alju07g0779	465	SMART	serkin_6	17	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g0779	465	SUPERFAMILY	Protein kinase-like (PK-like)	14	312	IPR011009	-
	Alju07g0779	465	ProSiteProfiles	Protein kinase domain profile.	17	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju07g0779	465	Gene3D	Transferase(Phosphotransferase) domain 1	8	339	-	-
	Alju07g0779	465	MobiDBLite	consensus disorder prediction	349	368	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g0779	Alju-ChrAlju07	13224028	13225425	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g0779	17	389	MAP Kinase Kinase Kinase	AT1G07150	52.208	1.72e-121	362

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Alju07g0779		Pkinase	2.2e-54	CL0016