LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju07g0732	ATGGCTAGAGGTCAATTAAAGGTTCTTAAAGCTCTTGATGCTGCGAAAACACAATGGTATCACTTTACGACGATCGTGATCGCCGGAATGGGTTTCTTCACCGATTCTTACGATCTTTTCTGCATCTCTCTGGTCACAAAACTACTCGGCCGTATATATTACTACCAAGACGGCTCTCCTAAACCCGGTTCTCTACCGGCCAACGTCTCCTCCGCCATAACCGGCGTCGCCTTCTGCGGAACCCTAATTGGCCAGCTCTTCTTCGGCTGGCTCGGAGACAGGCTCGGAAGAAAACGCGTCTACGGCATAACCCTAATGCTCATGGTAATTTGTTCAATCGGGTCGGGTCTCTCTCTCGGATCCAACACTAAAGCGGTTATGGCCACTCTTTGCTTCTTCCGATTCTGGCTCGGCTTCGGCATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCGGAGTATTCCAACAAGAAGACTCGCGGCGCTTTCATCGCAGCCGTCTTCGCCATGCAAGGGTTTGGAATTCTCGCCGGCGGCTCTGTGGCGATCATCCTCTCGGCGATTTTCAAAGCAACCTTTCCGGCACCATCGTACCAGACGAATCCAGTTCTATCCACCGTTCCAGAATCTGATTACGTCTGGAGATTGATTCTCATGTTCGGCGCTGTCCCTGCGATTTTAACTTATTACTGGCGTATGAAGATGCCGGAAACCGCTCGATACACCGCCTTGGTCGCGAAGAACGCGAAGCAAGCGGCTTCTGATATGTCCAAAGTTCTTGAGGTTGAGATAGAACCGGAAACTGATCTGAAAATTTCTGAGAACAATGATGATAATAAGTTCGGGTTATTTTCGAAGCAGTTTCTTCGCCGTCATGGACTTCACTTGCTTGGAACCACCACGACGTGGTTTTTTCTGGACATAGCTTTTTACAGTCAGAATCTGTTTCAGAAAGATATATTTAGTTCGATTGGTTGGCTTCCTAATGCGAAGAAGATGAGCGCCATTGAAGAGGTTTACATGATCGCCAGAGCTCAAACCCTAATAGCGCTTTGCAGCACCGTGCCGGGCTATTGGGTTACGGTGGCGCTAATTGATAGGATTGGAAGGTTCTCGATTCAGATCATCGGATTCTCCTTCATGACGATTTTCATGTTTGCTTTGGCCATTCCTTACCAGTATTGGACTATGAATGGTCACCAGATATGGTTCGTGGTAATGTACTCAGTGACCTTTTTCTTCTGCAACTTTGGGCCCAATTCTACGACGTTCATCGTCCCGGCGGAGATATTTCCGGCGAGGCTGAGGTCTACATGCCACGGAATCTCGGCGGCAGCAGGCAAGGCCGGCGCGATAGTGGGGTCGTTTGGGTTTCTGTATGCTTCAAACTCAATTGGAGTTAGGAATGCATTGATAATTCTGGCTGTGGTTAACTTGTTGGGATTGATGTTTACTTTTCTGGTGCCGGAGACTAAGGGGAAATCGCTGGAGGAGATTTCTGGTGAAGGCGAGGACGATGATGAAGAAGGGGCTAGTAATGATGTTTATAGAGAGTATATTGAAAATATGGTTTAG	1578	0.4854	MARGQLKVLKALDAAKTQWYHFTTIVIAGMGFFTDSYDLFCISLVTKLLGRIYYYQDGSPKPGSLPANVSSAITGVAFCGTLIGQLFFGWLGDRLGRKRVYGITLMLMVICSIGSGLSLGSNTKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGSVAIILSAIFKATFPAPSYQTNPVLSTVPESDYVWRLILMFGAVPAILTYYWRMKMPETARYTALVAKNAKQAASDMSKVLEVEIEPETDLKISENNDDNKFGLFSKQFLRRHGLHLLGTTTTWFFLDIAFYSQNLFQKDIFSSIGWLPNAKKMSAIEEVYMIARAQTLIALCSTVPGYWVTVALIDRIGRFSIQIIGFSFMTIFMFALAIPYQYWTMNGHQIWFVVMYSVTFFFCNFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYASNSIGVRNALIILAVVNLLGLMFTFLVPETKGKSLEEISGEGEDDDEEGASNDVYREYIENMV	525

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju07g0732	525	FunFam	Inorganic phosphate transporter 1-6	20	515	-	-
	Alju07g0732	525	Gene3D	MFS general substrate transporter like domains	20	265	IPR036259	-
	Alju07g0732	525	Gene3D	MFS general substrate transporter like domains	272	518	IPR036259	-
	Alju07g0732	525	CDD	MFS_PhT	25	493	-	-
	Alju07g0732	525	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	20	498	-	-
	Alju07g0732	525	NCBIfam	phosphate:H+ symporter	10	503	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Alju07g0732	525	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	494	IPR020846	GO:0022857
	Alju07g0732	525	SUPERFAMILY	MFS general substrate transporter	12	501	IPR036259	-
	Alju07g0732	525	Pfam	Sugar (and other) transporter	26	501	IPR005828	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju07g0732	Alju-ChrAlju07	11611227	11612804	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju07g0732	1	509	Inorganic Solute Cotransporters	AT3G54700	74.138	0.0	806