Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0661 ATGGGTAAGAAAAAGAAACAATTTGGAGAAAAATCAAGTGATAAGGACAATGAGGCATTCATTCTCAGGTCTCAAGAGTTAAAACAAGAAGGAAACCAGCTGTTCCAAAGGAGAAAATATGAAGTAGCCCTCAAGAAATACGAGGAAGCCATTAAATTCCTACCAGAAAATCATATAGAAGTGTCTTGCCTACGGAGTAAAAAGGCTGCATGCTACATGCAGGATGAGGGATATGGAGGATACCCGGGAGCCATTTATGAATGCAATTTAGCTCTTAAAGTGAATCCAAAGTACAGTAAAGCCCTTTTGAATAGAGCAAGTTGTTATGAGGCTATAAATAGTCTAGATGATGCTCTAAGAGATGTTAGTACTGTACTAAAGATGGAGCCAAACAATAAGATGGCGTTGGGAATTTTTGAGAAGGTGAAAAATAAACTTGAAAAGAAGGGATTAAATGTAGATGACTTTGCTATAATTGAGCTTCCTTCTGATCATGCTGGACCTTCTTGTGTGCCTCCAGAAGAGAAGAACAAAAAGGTTCAGTTATTGACTGCAGATAATGTAGGGCTTCAAAAGTTAGCTGAGGAAAAGTTGAAAGCAAAGAAGTTGAAGGAGAAGAAGAAGGCTGTGAACAAATCCAATAAAGAGAATTTGGAGGACAGTATTGGGAAGAAGCAGGTGGTTGCAAACAAATCCGAAGAAAAGGTGGCCAAGGAAATGATTAGTGAGAAGAAGGCTTATACAAAGGAGGTTATTGAGGAGAAATTTAGGGATAGAAAGGAAGAAGCAACCAAGAAAAGAGCGAAACTTGTTTATGGTGAGGACATTAGATTTGCAACATTAGAAGTCAATTGTAGCCTCCAGCATCTAAGGGAAGTTATCGGCAACCGATTTCCAAGGCTAGGAGCGTTTCTTGTCAAATACAAGGACGAAGAAGGTGATTTAGTCACAATCACTTCCGATGAAGAATTAAGATGGGCTGAAACATCAACAGGACCAAAGAGTTATATGCGCCTACACATAGTGGATACTGATCCTAAGCAGGATCCATTGTTTGAGAAACATTGTCCGCCTTCCTTCTAG 1083 0.3934 MGKKKKQFGEKSSDKDNEAFILRSQELKQEGNQLFQRRKYEVALKKYEEAIKFLPENHIEVSCLRSKKAACYMQDEGYGGYPGAIYECNLALKVNPKYSKALLNRASCYEAINSLDDALRDVSTVLKMEPNNKMALGIFEKVKNKLEKKGLNVDDFAIIELPSDHAGPSCVPPEEKNKKVQLLTADNVGLQKLAEEKLKAKKLKEKKKAVNKSNKENLEDSIGKKQVVANKSEEKVAKEMISEKKAYTKEVIEEKFRDRKEEATKKRAKLVYGEDIRFATLEVNCSLQHLREVIGNRFPRLGAFLVKYKDEEGDLVTITSDEELRWAETSTGPKSYMRLHIVDTDPKQDPLFEKHCPPSF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0661 360 CDD PB1 273 341 - -
Alju07g0661 360 PANTHER PROTEIN CLMP1 6 354 IPR044517 -
Alju07g0661 360 Gene3D Tetratricopeptide repeat domain 23 166 IPR011990 GO:0005515
Alju07g0661 360 Gene3D - 264 346 - -
Alju07g0661 360 ProSiteProfiles TPR repeat profile. 24 57 IPR019734 GO:0005515
Alju07g0661 360 SMART PB1_new 265 344 IPR000270 GO:0005515
Alju07g0661 360 Pfam PB1 domain 267 343 IPR000270 GO:0005515
Alju07g0661 360 SUPERFAMILY TPR-like 25 147 IPR011990 GO:0005515
Alju07g0661 360 SMART tpr_5 24 57 IPR019734 GO:0005515
Alju07g0661 360 SMART tpr_5 99 132 IPR019734 GO:0005515
Alju07g0661 360 ProSiteProfiles TPR repeat profile. 99 132 IPR019734 GO:0005515
Alju07g0661 360 SUPERFAMILY CAD & PB1 domains 267 353 - -
Alju07g0661 360 ProSiteProfiles PB1 domain profile. 265 344 IPR000270 GO:0005515
Alju07g0661 360 Coils Coil 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0661 Alju-ChrAlju07 10111065 10112147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0661 12 133 Calmodulin-binding Proteins AT3G25230 32.308 1.28e-08 54.7