Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0629 ATGGAGTTCGTGGGCAAAACTGTTAAGAAGGAGGTCAAGGGGGTTGGGATTATCTCGGGAACAGTGAAATCTTTCGATTCATCTTCTGGCTTCGTTGAGATCGTTTACGAAGATGGTAATTCTGAGGAGCTTGAATCGTCTGACGTGGCTTCTCTTGTTCAAGGTGAACCAGAGCTTGTAAAGGTGATGAAGCGCAGGGGAAGAAAGCCCAAGAAGAGGCGTCGTGTAGAAAAGAAGCATGACACCAGTGTAAGCCCAGGTAATATTGATGAGAATTTGAGTGTTTCCATGCTAAATGATTCTGAATTTAGGGGGGTTTCGGATGAAGGTGTTTCTTCTAGTGGGAATTTAAAAGTAAATGGTGAATTAGATAGTGGGTTGAAGGGAAGCCCGGGAATGGCAAATGGGGTGGGAGGGGATTTAACTTTGGGAACTGAAATCATGGGGAATTTGAATTGGAGTGCCAACTCTAACGGGATCAAAGTAGTTCAACGGACGGAAAGCGGGCATGAAGAGAAATCCAAAGAAAGTATATCTACTAATGGTAATTCCAGCATAACGGATTGTGTAAAAGATGGGCTTGATTTGAATGCTAGACTTAACCTGAACGAGGCTTTGGATCTGAATGATGGGTGTAGTTCACATGTTAATACTGAGGATGATTTGAAGAAAAGGGGTTGCATTGATTTAAATGTGGATGTGAATCATGAAACTGATGCCAGCGCGAACTTGAGTAATTTAGGTTGTCCAGCAGCTGAAATGTCGAAGCGGGAATGTAATTTTGATTTGAATGTGGAGGTATGTGATGAAGCTAACGAAACTCAGGGTGATGGTGCTGGAGACATAATGTCAGATGGAGGTGATTCGGTAGGCAAAATGGGGCAAAGCCCCAAGTCAGAGACAGATATTAATCAAAATTCTGTACAAGACGATAGTATTAAAAGGAATTTGGATGATATCACTGATTCGGTGAAATTGGAGGGAATTGATAGTTTCCATGGGTGTGCAGGTCAAGACACTTCAATGACTTTGCTTGAGGAAAAGGAAGATGGAGTTTACAATGGAGGTGCTGTGGCTCTTGACTCTCTTGGGGTTTCGAATGCTATTTCTACTAAGGATTGTGATTCTGCGGAGGTTTGGCAGGAGCATAAGCCTTCTGAAGCTGGTATTGCTATAACTCATGAATGTCAAAATGAGCCTCAAAGCCAATCTAAACAAGGAAGTGGCCAAAGGAAGAGAAGAAAACTATCAGATAATCTGAAATCTGCTCCAGAAACTGTTTTAAGGAGGAGTTCTCGCCGTGCATCAGCTCTAAAACGTGATTCAAGCCCTATAACAATGAATGTGATGGATGATCCTTTGATGTCTCCAGGGCCCAGTGCCATAACAGAAGAAAAAACAGTTGTTTCTGGTTCCAAGCAGTATGAACAGTGCAGTGAATATCCGCCAAAGCTGCAACTACCCCCATCGTCTCAAAATTTGAACTTAGATGACATTCCTGTTCTTGATCTTTTTTCTATTTATGCTTGTTTGAGGTCCTTCAGTACTATACTATTTTTAAGTCCTTTTGAGTTGGAGGATTTTGTAACTGCACTGAAGAGTGTAAATCCTAACATATTATTCGACAACATTCATTTTTCTATTTTAAAAACTCTTAGAAAGCACTTGGAATACCTTTCAAATGAAGGTTGCCAATCTGCATCCGATTGCTTGAGAAATCTGAACTGGGATTTGTTGGACCTTGTCACGTGGCCCATTTTTATGGCTGAGTATCTTCTGATTCATGGTTCTGGACTTCAAACTGGTTTTGATCTTAAGTACTTGATGTTTGGAGGTGACTACCACAAGCAGCCTGTAACTTTGAAGATTGAAATTCTTCAGTGCCTTTGTGATGATATGATGGAAGTGGAAGCCATAAGGTTGGAGCTTAACAGAAGATCTTTGGTGACTGAGGCTGATATGAATTTTGATCAAACTATGTGTTTTGAGATTTGCAAGAAAAGAAGATCTCTAATGGACATGTCTGGCGGCTTTTCCATGTCTGAGGAGATTGTTGATGTCACAAATGACTGGAACAGTGATGAATGCTGCCTTTGCAAGATGGATGGAAATTTGATATGTTGTGATGGTTGCCCTGCTGCATTCCACTCCAGGTGTGTAGGGGTTGCAAGTGACCATTTACCTGAAGGTGACTGGTATTGCCCTGAGTGTGCATTTGGCAGACGTAACCCTTGGATGAAACCGCAAAAATCACTTCGAGGAGCAGACCTTTTGGCGATTGATCCTCATGGTCGTCTTTATTTTGATAGCTGCGGTTTCCTGTTAGTGTCAGATTCATCTGACATGAGATCCTTGTTCAATTACTACCATATAAATGATCTGCATGTTGTAATTGAAGTGTTAAAAGCGGCTGATGCTTTCTATGGTAGCATATTAATGGCAATCTGCAAGCACTGGGATATTCCTTTTAACTTTATCTCAAATCAAAGTGCTAGCAGGAGCATGCATATGACGGCAGGATACTCTGCTACATATCCATCCTCGGCACCTTTTTCATCCTCAGAAGCATTCTTGGACAAGAATCAGGCTGCTGATCAAAGAAAGTATGGAGAAACTTCTACTGTACAACCTGTTGGCCAAGAGTTTCTCAAATGTGAGACACAAGTAGATTCAGTGATAATGACAGAAAGTCCATGTGTTGCTTCAGAGGTATCAGCTGATACCACAAAAATGAGGTCAACCACTGATGAAGATCCTCTAATACATGGACTCCATGATTCCAGAAGATCTGATGGGGCCCTGAATCAGCCAGGAATACCAGAGAAATTGCACCCAGTCAGTCACTCTTCTTTGAGGTCTTCCCGCTTACATACAAGCCATAAGGCAAACTTAACATCTGCAGGTATTGGTAATAATACTGCATCGGCTATATCCACTGGGAATAGAGCTACTTCAGAAATTCCATGTGGAATTGACTACATAAACTATTACAGCTTTGCTCGAACAGCTTCATTAGTTGCAGAGGAGTTGGTACGTAAATCCCCTGAAAAGGTCAACAAGAGTATTGAAATGTCTGAAGAAGACTTAATTTCAGAACAAGCGAAGACTATTATTAAGAAATCTAGGAGCTTCTACTGGCCAAGTTCTCAAAATATTAATGCAGCTGCCCAAAAGGAAAAATGTGGGTGGTGCTTTACGTGCAAAGTTGAAAATGATGACAGAGATTGCTTGTTTAACAATCTGGTGATGCCGGCTCAGGAACTGTCTAAAAGTGATTTAGTTGGGTTTCAGCCAAAGAACCACAATTCTCATCTTAGAGATGTCGTATTTTATATTCTCTCCCTTGAGGATCGATTACGTGGGCTTCTATTGGGGCCTTGGTTGAGCCTCCATCATTCTAAGAATTGGCGTAACAATCTTCTCAAGGCATCTGATGTTGCATCTATTAAATGCTCATTATTGACTTTAGAGTCCAATTTGCGGCCTCTTGCCCTTTCGGCTGACTGGTGGAAACATGTGGATTCTGCTGTTACCATGGGTTCAGCCTGTCATATTGTGGCCAGTTCACGCACATCTTGGAGGCATAGTATTGGAAGGAAAAGGGCCAGGTGCTCTGATATTGAGTCCAGTGCATCTTCTAATGCAAGTGGTTTGGGATCATATTGGTGGAGAGGTGGTCGGCTTTCCCGTCATTTGTTTAATTGGAAGGTTTTGCCCCACTCTTTGGTTACCAAGGCTGCTAGACAAGCTGGGTGTACAAAGATACCGGGCATTCTATATCTTGAGAATTCTGATTTTTCAAGGAGAAGCAAATGTGTTGCTTGGAGAGCTGCTGTTGAGACATCAATTAGTGTGGAGCAACTTGCTATCCAGGTTAGAGAGCTTGATTCAAACATTAGGTGGCATGACATTGAGAATACTCATCCTCTATGCGTGCTGGACAAGGAATCCAGAAAATCAATCAGGCTGTTCAAAAAAGTAATTGTACGCAGGAAGAGCACTGAAAAGGAATGTGTAAAATATCTTCTTGATTTTGGGAAGAGAAGGGCTATTCCAGATATTGTCAAGAAACATGGTTCGTTGTTGGAAGAATCCTCAAGTGACAGGAAAAAATATTGGCTGGAAGAACCTTATGTTCCCTTGCATTTTATAAAGAATTTTGAGGACAAAAGAATTGCTCGCAAGTCCAATGAAATGAAACCAGGAAAAGTTCTGGAGAATAGTGGATTTAATAAGAAATCTACCCAAAAACGGGGTTTTTCATATTTGTTTTCTAGGATGGAAAAGCCTACCTATCATCTGTGTGGCCACTGCAACAAAGATGTTTCAACCAGGGAAGCTGTGAGCTGCCAGTACTGTAATGGATTCTTCCATAAGAGGCATGCCAGAAAATCCGGTGGCACTGCTGAATGCACATATTCATGTCACAGATGCCTGGATGGGATGCGTGTGAATTCTAATTCAAAAAGAAGAAAAATTGACCCAAAACTAGGGAATATTCAGTCACAAAAGGGTCAAAAGGCCCCGTCAGTGGGTAGAGGTAGACCAGTCAAGCACAAAGGCAGTAAAAAGCCATTGAGTAAGAGGCGGCAAGGTAAATCTCAAACCAATAAAAAGGCCCCACCGAGTATACCTCTTCGTCGTTCAGCCAGGAAGGCCAAATGCTTGTATGTACAAAAGAAAAGGAATGTGGGACGTAAAAAAGGAAAGAAAAATAAATCCAAGAAGATAACACCAAGGAAGCCTAAGGAAATGGTTACTTCTAGTAAGAAAAGAGCTCTAGTCTGTAAATCTAAGCAAACAGTAACTTTTGAGCGTAAGAAAAGAACTCAAGTCTGTAATAGTTACTGGCTTAATGGTCTTAGGCTGTCCACAAAGCCAAATGATGAACGAGTAATGCTGTTTAAGGAAAAAAATCATCTTGCCCCCTCAGAAGGTTTTTCTGGCATCTTTGATCAACCTAAATGTCATATCTGTTGTGGAGATGGGTGCACATTGGATTATATTGCTTGTGAAATCTGTGGAGAGTGGTTTCATGGGGATGCTTTTGGACTCACTCTAGAGATTGTCAGACAACTTATTGGATTTAGATGCCATGTTTGTCGTGATAGGATTGCACCAAGTTGTCCCCACAAGAACAGTAATGCCTTGACTCAAGATGAAATCATAACTGCAACTGGGTGTGCCGAGGAACTACCTAATTCTGTTTCACTTCAGTCATTGAGTCAGGTTTGA 5235 0.4151 MEFVGKTVKKEVKGVGIISGTVKSFDSSSGFVEIVYEDGNSEELESSDVASLVQGEPELVKVMKRRGRKPKKRRRVEKKHDTSVSPGNIDENLSVSMLNDSEFRGVSDEGVSSSGNLKVNGELDSGLKGSPGMANGVGGDLTLGTEIMGNLNWSANSNGIKVVQRTESGHEEKSKESISTNGNSSITDCVKDGLDLNARLNLNEALDLNDGCSSHVNTEDDLKKRGCIDLNVDVNHETDASANLSNLGCPAAEMSKRECNFDLNVEVCDEANETQGDGAGDIMSDGGDSVGKMGQSPKSETDINQNSVQDDSIKRNLDDITDSVKLEGIDSFHGCAGQDTSMTLLEEKEDGVYNGGAVALDSLGVSNAISTKDCDSAEVWQEHKPSEAGIAITHECQNEPQSQSKQGSGQRKRRKLSDNLKSAPETVLRRSSRRASALKRDSSPITMNVMDDPLMSPGPSAITEEKTVVSGSKQYEQCSEYPPKLQLPPSSQNLNLDDIPVLDLFSIYACLRSFSTILFLSPFELEDFVTALKSVNPNILFDNIHFSILKTLRKHLEYLSNEGCQSASDCLRNLNWDLLDLVTWPIFMAEYLLIHGSGLQTGFDLKYLMFGGDYHKQPVTLKIEILQCLCDDMMEVEAIRLELNRRSLVTEADMNFDQTMCFEICKKRRSLMDMSGGFSMSEEIVDVTNDWNSDECCLCKMDGNLICCDGCPAAFHSRCVGVASDHLPEGDWYCPECAFGRRNPWMKPQKSLRGADLLAIDPHGRLYFDSCGFLLVSDSSDMRSLFNYYHINDLHVVIEVLKAADAFYGSILMAICKHWDIPFNFISNQSASRSMHMTAGYSATYPSSAPFSSSEAFLDKNQAADQRKYGETSTVQPVGQEFLKCETQVDSVIMTESPCVASEVSADTTKMRSTTDEDPLIHGLHDSRRSDGALNQPGIPEKLHPVSHSSLRSSRLHTSHKANLTSAGIGNNTASAISTGNRATSEIPCGIDYINYYSFARTASLVAEELVRKSPEKVNKSIEMSEEDLISEQAKTIIKKSRSFYWPSSQNINAAAQKEKCGWCFTCKVENDDRDCLFNNLVMPAQELSKSDLVGFQPKNHNSHLRDVVFYILSLEDRLRGLLLGPWLSLHHSKNWRNNLLKASDVASIKCSLLTLESNLRPLALSADWWKHVDSAVTMGSACHIVASSRTSWRHSIGRKRARCSDIESSASSNASGLGSYWWRGGRLSRHLFNWKVLPHSLVTKAARQAGCTKIPGILYLENSDFSRRSKCVAWRAAVETSISVEQLAIQVRELDSNIRWHDIENTHPLCVLDKESRKSIRLFKKVIVRRKSTEKECVKYLLDFGKRRAIPDIVKKHGSLLEESSSDRKKYWLEEPYVPLHFIKNFEDKRIARKSNEMKPGKVLENSGFNKKSTQKRGFSYLFSRMEKPTYHLCGHCNKDVSTREAVSCQYCNGFFHKRHARKSGGTAECTYSCHRCLDGMRVNSNSKRRKIDPKLGNIQSQKGQKAPSVGRGRPVKHKGSKKPLSKRRQGKSQTNKKAPPSIPLRRSARKAKCLYVQKKRNVGRKKGKKNKSKKITPRKPKEMVTSSKKRALVCKSKQTVTFERKKRTQVCNSYWLNGLRLSTKPNDERVMLFKEKNHLAPSEGFSGIFDQPKCHICCGDGCTLDYIACEICGEWFHGDAFGLTLEIVRQLIGFRCHVCRDRIAPSCPHKNSNALTQDEIITATGCAEELPNSVSLQSLSQV 1744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0629 1744 Pfam DDT domain 501 554 IPR018501 -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 910 929 - -
Alju07g0629 1744 ProSiteProfiles Zinc finger PHD-type profile. 693 740 IPR019787 -
Alju07g0629 1744 SMART PHD_3 1655 1702 IPR001965 -
Alju07g0629 1744 SMART PHD_3 1434 1479 IPR001965 -
Alju07g0629 1744 SMART PHD_3 695 738 IPR001965 -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 64 92 - -
Alju07g0629 1744 SMART testlast3 498 558 IPR018501 -
Alju07g0629 1744 SUPERFAMILY FYVE/PHD zinc finger 690 749 IPR011011 -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 397 453 - -
Alju07g0629 1744 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1651 1709 IPR013083 -
Alju07g0629 1744 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 687 753 IPR013083 -
Alju07g0629 1744 ProSiteProfiles DDT domain profile. 498 558 IPR018501 -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 1553 1578 - -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 1486 1590 - -
Alju07g0629 1744 Pfam PHD-finger 696 738 IPR019787 -
Alju07g0629 1744 PANTHER PHD FINGER FAMILY PROTEIN 2 1712 - -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 947 975 - -
Alju07g0629 1744 ProSitePatterns Zinc finger PHD-type signature. 696 737 IPR019786 -
Alju07g0629 1744 CDD PHD1_AIRE 695 737 - -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 64 78 - -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 1513 1535 - -
Alju07g0629 1744 SUPERFAMILY FYVE/PHD zinc finger 1649 1704 IPR011011 -
Alju07g0629 1744 MobiDBLite consensus disorder prediction 904 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0629 Alju-ChrAlju07 9628628 9641384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0629 1 1714 PHD Transcription Factor Family AT5G12400 40.238 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Alju07g0629 DDT 4.1e-12 No_clan