Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0587 ATGGTAAAGCTTATTCAAGCATTTGAAACCATCACACGATTTAGCTTTCCGCTTTCCATCACTCTCTTTCTCTCTGCCGTTTCTTGCCCTTTTGTGGATTCTTGGGATTCAATGGAAGAAGCTTGTACAGATGCAGAAGCTGGAGTTCGAAGTGATGGAGATTCCTTGTCAGATCCTGCTCATTACCATCGTCTACAGAGATGCACAGGAAATGAAAAAGGTGATAATTCCTCCTTGCTTCTGCATTCCAGACGACCAAGCCTCGCCTCTTTGCAGATACCAGTAGGGTCAGTAGAAAGTATATTATCATCTTCTGCAAAGGCAGATGTTGTATTACTGCCAAGTCCAGGTTCCTCTCGAGGAGGACTGCCTCCAAGATCAAATTTAGCCAGAGTCAAGTCTTCCGTGAGAAGTTTACTTTCTCAGAGGAGTTTTAAGGCAAAAAATTGTTCTCCAGATTGTGAAAGGGAAGTTCTCATTGTTTCTGACATTCCCTCATCAGATGGAGCTTCGCACAAGCCTTCAACTTCAAGGTCCCTTTCTTTAAATAAGGTTTTGTTCCCTTCATCAACAAAAGCATCAAATTCATTACCGGTTACACCAATGGCAAATACAGTTGCAGAGACTGTGCATGGAAGTCATCTAGGAAGTAATCCTGACTTAAGTAAAATGGAAGTCAAGCATCACATGACTCGATCATTTTCAGTTCCAGTTAATATCAAATCCTCTAGTTTAAAGCGAACTGGTTCTAGTGGTTTGATCCGAGTAATTTCAGCAAGACAACATCCTGCAGCTGTTAATGACTATTCAATTGATAAAGCTTCAGTGCCACAGATTGCCATTGAAGATGCTACTGAGGACATTCCTGAAGAAGAAGCAGTTTGTAGGATTTGTTTAATGGAGCTGGGGGAAGGTGGGGATACTCTTAAGATGGAGTGCAGTTGTAGAGGAGACCTTGCGCTTGCTCACCAAGAGTGTGCAGTGAAGTGGTTTAGCATAAAAGGAAACAAGACATGTGATGTTTGCAACCAGGAAGTCCAAAATCTTCCAGTGACTCTATTGAAAATCCAAAGTCCGCATCCTACTGCCGAACGGTCATCAAATACCCCACAGCAGACAGAAGTTTCTTTTCACAGGATCTGGCAGGATGTACCAGTACTTGTCTTGGTCAGCATGCTTGCTTATTTTTGCTTTTTAGAGCAACTTCTGGTTTCAGATATGGGTCCTCGTGCTCTTGCCATCTCTCTACCTTTTGCCTGCACGTTTGGCCTTGTTGCTTCTTTGCTTTCTTCGACCATGGTGAGCAGGGATTACATGTGGGCTTATGCTTGTTTCCAGTTTGCAATTGTCATCCTGCTGGCTCATGTATTTTACACCATATATAAGTTGAATGGTGTTCTCTCGGTTATGCTTTCTTCACTTGCTGGATTTGCAATAGCAATGGCCGTGAATTATCTGCTCAAGGTATTTTTAAATTGGAGATTTAGAAGGCAGATACAATCTATTAATCAGACCCTAACAGAGCAAGGACAAGGACAGCATAATAGGCGTCCAAGACAGCAGCAAGAGCAACATCAATAA 1581 0.4244 MVKLIQAFETITRFSFPLSITLFLSAVSCPFVDSWDSMEEACTDAEAGVRSDGDSLSDPAHYHRLQRCTGNEKGDNSSLLLHSRRPSLASLQIPVGSVESILSSSAKADVVLLPSPGSSRGGLPPRSNLARVKSSVRSLLSQRSFKAKNCSPDCEREVLIVSDIPSSDGASHKPSTSRSLSLNKVLFPSSTKASNSLPVTPMANTVAETVHGSHLGSNPDLSKMEVKHHMTRSFSVPVNIKSSSLKRTGSSGLIRVISARQHPAAVNDYSIDKASVPQIAIEDATEDIPEEEAVCRICLMELGEGGDTLKMECSCRGDLALAHQECAVKWFSIKGNKTCDVCNQEVQNLPVTLLKIQSPHPTAERSSNTPQQTEVSFHRIWQDVPVLVLVSMLAYFCFLEQLLVSDMGPRALAISLPFACTFGLVASLLSSTMVSRDYMWAYACFQFAIVILLAHVFYTIYKLNGVLSVMLSSLAGFAIAMAVNYLLKVFLNWRFRRQIQSINQTLTEQGQGQHNRRPRQQQEQHQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0587 526 SUPERFAMILY RING/U-box 291 346 - -
Alju07g0587 526 CDD RING_CH-C4HC3_MARCH 295 343 - -
Alju07g0587 526 PANTHER OS02G0165000 PROTEIN 75 509 - -
Alju07g0587 526 MobiDBLite consensus disorder prediction 506 526 - -
Alju07g0587 526 ProSiteProfiles Zinc finger RING-CH-type profile. 287 349 IPR011016 GO:0008270
Alju07g0587 526 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Alju07g0587 526 Pfam RING-variant domain 295 342 IPR011016 GO:0008270
Alju07g0587 526 SMART ringv_2 294 343 IPR011016 GO:0008270
Alju07g0587 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 351 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0587 Alju-ChrAlju07 8698361 8706292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0587 278 349 C3H Transcription Factor Family AT2G37950 43.836 6.51e-13 66.2