Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0528 ATGGGAAATTTCTGTAGGAAACCCATTGTTCACGTCTCTTCCTCCAACATTTCTGGAAAGGGGAAGTCTCGAAGTGAGATAAGTAAGAATTCAAATTCTTCAGATGGAAAAGCTGCATCACAAACTTTAGAACCAACTATTGGCGGATCCATCTCTTCAAGTCTTAAATCCTTCAGCTTCAATGATCTAAGAGAAGCCACAAGGAATTTCAGACAAGAAAACCTAATTGGGGAGGGAGGGTTTGGGTTTGTGTACAAGGGATGGATTAATGAGAACTCCTTTGCTCCCACGAGACCGGGGAGCGGGATCGTGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGTCAAATTCACCATGAAAATGTGGTTAAACTTATTGGTTATTGCTCAGACGCTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAGAGGAAGTTTGGAGAGTCATTTATTCAGAAAAGGTGTTCAGCCCATATCATGGGCTGCGCGGATCCATATTGCAGTTGGCGTTGCTAGAGGTTTAGCATTTTTGCATGCCTTGGATGCAAATGTTATCTACCGTGACTTAAAGGCTTCTAATGTATTACTTGATTCGGACTTCAACCCTAAGCTTTCAGATTTCGGGTTGGCAAGAGATGGTCCTACTGGAGACAACACTCATGTTTCAACCAGAGTTATTGGAACTCAAGGTTATGCTGCGCCAGAGTATGTTGCTACAGGTCACTTGACATCGAGGAGCGATGTATACAGCTTTGGTGTTGTCTTGTTAGAGTTACTGACAGGGAGAAGGGTGGTGGAGGCTGAGAAAGCTGGAAATGCACGGGAAACTCTGGTTGACTGGGCGATGCCGTTTCTCAAAGACAGCAAGCGGATTTCAAGGGTCATGGATTTGAGGTTATGTGGTCAGTACTCCAAAAAAGGAGCTCAAGCTACTGCTGCACTTGCATATCAATGCCTAAATGCAGATCCAAGATACAGACCAACTATGATTAGTGTTCTTGCCACGTTACAAGAACTTCACTCCTCGAACACAACAATCCCAAGGACCCCGCCAAAGTCTGAGTCAAGGAACCATACCAGCAACAGCAAGCATGCTCGTCATTCCCTAAAGTCAATGAGAAATACACGCTGA 1176 0.4422 MGNFCRKPIVHVSSSNISGKGKSRSEISKNSNSSDGKAASQTLEPTIGGSISSSLKSFSFNDLREATRNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGIVVAIKKLKPESFQGHKEWLAEVNYLGQIHHENVVKLIGYCSDAKNRLLVYEFMQRGSLESHLFRKGVQPISWAARIHIAVGVARGLAFLHALDANVIYRDLKASNVLLDSDFNPKLSDFGLARDGPTGDNTHVSTRVIGTQGYAAPEYVATGHLTSRSDVYSFGVVLLELLTGRRVVEAEKAGNARETLVDWAMPFLKDSKRISRVMDLRLCGQYSKKGAQATAALAYQCLNADPRYRPTMISVLATLQELHSSNTTIPRTPPKSESRNHTSNSKHARHSLKSMRNTR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0528 391 SMART serkin_6 70 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0528 391 CDD STKc_IRAK 76 354 - -
Alju07g0528 391 SUPERFAMILY Protein kinase-like (PK-like) 52 377 IPR011009 -
Alju07g0528 391 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0528 391 ProSiteProfiles Protein kinase domain profile. 70 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g0528 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Alju07g0528 391 MobiDBLite consensus disorder prediction 356 391 - -
Alju07g0528 391 MobiDBLite consensus disorder prediction 356 371 - -
Alju07g0528 391 FunFam Serine/threonine-protein kinase BIK1 38 155 - -
Alju07g0528 391 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Alju07g0528 391 MobiDBLite consensus disorder prediction 377 391 - -
Alju07g0528 391 PANTHER OS01G0588500 PROTEIN-RELATED 34 355 - -
Alju07g0528 391 MobiDBLite consensus disorder prediction 15 45 - -
Alju07g0528 391 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 364 - -
Alju07g0528 391 Gene3D Phosphorylase Kinase; domain 1 49 155 - -
Alju07g0528 391 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0528 Alju-ChrAlju07 7364214 7367798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0528 56 382 Glycoside Hydrolase AT3G07070 46.866 3.50e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju07g0528 Pkinase 4.2e-48 CL0016