Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0525 ATGACGGGTGGAGGTGATGCTCCAAAAGTGCCCAAAGGTCGGCAGTCCGTGTTTGAAATTACAGAAGCAAGACGCAAAGGTAATGCTGGAGGAGAAGTGCCTCTGAAGAAAGGCCCTTGGACGGCAGCAGAGGATGCAACTTTAGTTGATTATGTCAAAAAACATGGAGAAGGAAATTGGAATGCAGTCCAAAAGCACTCAGGCCTTGCCCGCTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCACTTGAGACCAGAACTAAAAAAGGGTGCATTTACTGAGGAGGAGGAGCGTCTGATTGTCGAGCTTCATGCTAAGATGGGAAACAAATGGGCTCGAATGGCAACAGAGTTGCCTGGACGTACAGATAATGAAATAAAGAACTACTGGAACACTAGAATTAAGAGAAGGCAACGAGCTGGATTACCGATTTATCCTCCTGAAGTATGCCAGCGGGTACGCTGTCAAGAAAATCAGAATATGGGTACTTTGATGGGTGGAGCCAACCAGCACTCCGAGATCTCACAAGATGGCAACTTCAATGTCCCAGAAGTGGATTTCGAAAATTATGATTTTAGTCGGGCTTATGCATTTGCTCCATCTATTTTAGATATTCCTGAAGGCAGTCTGTTTCAACAACCTGTGGGCCCACCATATAATGATCTTATTTTGTTTGGAAACAGTGCGAAACGCCTTAGGGAGTCAGATATGTTTTATAATAGATTTGACAATAGTAGCAGCTGTATGATCCCTGCGAATGATAAGTTTGCGAATTATCCTGCTGAGCCGCCTCTTTTGTCATCTCCAAGCAATCTGCCCCTTGACACCAATTATCTGTTTCGTGGTGAAAATCTTCATGGCAGCCATGCCGCTTTAAATGGCACTCTCTCTTCTTCGGCGCCCATACCTGAGGCAACGAAGCTGGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGCTAGTTGGGACGCAAATGCGTCCCCGCTTCCTTCACTGGAGTCTGTTGATACAATGTTTCAGTCTTCTCCAGTTGAACAGTATCAGTCATGTGCTGTTACTCCAGATAGTAATGGTTTGTTAGAATCAATAATCTATGATACCAGGCTTCCCAGGGGCTCAAATAATAATGATTCATTGTGGAATACTACCGATGAATGGATGGTGAATGTGGCTAAAACTGATGCAGAATGGGACCCGAATTCACCCTTTGGTCACTCTTCTGCTTCAGTTCTTACAGATTATACTCCTCCTGTTAGCGTCAGCTCAGTTGATGACCCCTACTATATGGAACACACAAGAGGTCATGAAATGAGACAGGAAGCGATTTCACAGGGTCCCCCTCACGTTCGCCAAAGCCAAGAAACTTCCAGTCAGATAGACATAACAAGGCCAGATGCTTTGCTCGACATGGGTTGGCTGGGGAATGAGACCGGTTACCTCTAG 1449 0.4548 MTGGGDAPKVPKGRQSVFEITEARRKGNAGGEVPLKKGPWTAAEDATLVDYVKKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPELKKGAFTEEEERLIVELHAKMGNKWARMATELPGRTDNEIKNYWNTRIKRRQRAGLPIYPPEVCQRVRCQENQNMGTLMGGANQHSEISQDGNFNVPEVDFENYDFSRAYAFAPSILDIPEGSLFQQPVGPPYNDLILFGNSAKRLRESDMFYNRFDNSSSCMIPANDKFANYPAEPPLLSSPSNLPLDTNYLFRGENLHGSHAALNGTLSSSAPIPEATKLELPSLQYLETQQASWDANASPLPSLESVDTMFQSSPVEQYQSCAVTPDSNGLLESIIYDTRLPRGSNNNDSLWNTTDEWMVNVAKTDAEWDPNSPFGHSSASVLTDYTPPVSVSSVDDPYYMEHTRGHEMRQEAISQGPPHVRQSQETSSQIDITRPDALLDMGWLGNETGYL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0525 482 Gene3D - 92 138 - -
Alju07g0525 482 FunFam MYB-related transcription factor 36 89 - -
Alju07g0525 482 FunFam Transcription factor GAMYB 92 138 - -
Alju07g0525 482 CDD SANT 39 84 IPR001005 -
Alju07g0525 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Alju07g0525 482 SMART sant 36 86 IPR001005 -
Alju07g0525 482 SMART sant 89 137 IPR001005 -
Alju07g0525 482 MobiDBLite consensus disorder prediction 442 462 - -
Alju07g0525 482 CDD SANT 92 133 IPR001005 -
Alju07g0525 482 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 28 477 - -
Alju07g0525 482 SUPERFAMILY Homeodomain-like 34 131 IPR009057 -
Alju07g0525 482 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Alju07g0525 482 MobiDBLite consensus disorder prediction 447 462 - -
Alju07g0525 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Alju07g0525 482 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Alju07g0525 482 Gene3D - 36 89 - -
Alju07g0525 482 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Alju07g0525 482 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0525 Alju-ChrAlju07 7297051 7301361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0525 35 482 MYB Transcription Factor Family AT5G06100 38.793 2.30e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju07g0525 Myb_DNA-binding 1.4e-14 CL0123